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General Biology: Cell Signaling and Metabolism - Enzyme Structure and Regulation

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  • What is paracrine signaling?

    Paracrine signaling is the secretion of a signal molecule by a cell into the local environment, affecting nearby cells in the immediate vicinity.

  • What role does a neurotransmitter play in signal transduction?

    A neurotransmitter acts as a signal molecule that binds to receptors and triggers a response, such as opening gated ion channels in neurons.

  • What are the three main types of transmembrane receptors?

    G protein-coupled receptors (GPCRs), channel-linked receptors, and receptor tyrosine kinases (RTKs) are all transmembrane receptors.

  • Which receptor type undergoes dimerization upon ligand binding?

    Receptor tyrosine kinases (RTKs) undergo dimerization when a ligand binds; GPCRs and channel-linked receptors do not.

  • What is a second messenger in cell signaling?

    A second messenger is a small molecule that relays signals inside the cell, such as cyclic AMP (cAMP).

  • What is the role of adenylyl cyclase in the cAMP signaling pathway?

    Adenylyl cyclase converts ATP to cyclic AMP (cAMP), which acts as a second messenger in the signaling pathway.

  • What is the correct sequence in a cAMP signaling pathway after receptor activation?

    G protein → adenylyl cyclase → cAMP → protein kinase A.

  • Why do signal transduction pathways have multiple steps?

    Multiple steps allow for signal amplification, increasing the cellular response to a single signal molecule.

  • What enzyme adds phosphate groups to proteins during signal transduction?

    Kinases add phosphate groups to target proteins, activating or modifying their function.

  • What enzyme removes phosphate groups to turn off signaling pathways?

    Phosphatases remove phosphate groups, inactivating proteins and turning off signal transduction.

  • Define catabolism.

    Catabolism is the cellular process of breaking down large molecules into smaller ones, releasing energy.

  • What is the difference between hydrolysis and dehydration synthesis?

    Hydrolysis breaks bonds by adding water; dehydration synthesis forms bonds by removing water.

  • Why can some bacteria survive in hot springs?

    They have enzymes with high optimal temperatures that remain functional at elevated heat.

  • What is activation energy in a chemical reaction?

    Activation energy is the energy barrier that reactants must overcome to form products.

  • How do enzymes affect activation energy and reaction rate?

    Enzymes lower activation energy and increase the rate of chemical reactions without changing free energy.

  • What is the enzyme active site?

    The active site is the region of an enzyme where substrates bind and catalysis occurs.

  • Why does reaction rate plateau at high substrate concentrations?

    Because enzymes become saturated when all active sites are occupied by substrate.

  • How can increasing enzyme concentration affect reaction rate?

    Increasing enzyme concentration can increase reaction rate if substrate is abundant and enzymes are not saturated.

  • What are cofactors and coenzymes?

    Cofactors are non-protein molecules required for enzyme activity; organic cofactors are called coenzymes.

  • What is feedback inhibition?

    Feedback inhibition occurs when the end product of a metabolic pathway inhibits an earlier enzyme to regulate the pathway.

  • What is allosteric regulation of enzymes?

    Binding of a regulatory molecule at a site other than the active site causes a conformational change that activates or inhibits enzyme activity.

  • What is cooperativity in enzyme function?

    Cooperativity is when binding of substrate to one subunit of a multisubunit enzyme increases substrate binding at other subunits.

  • How does competitive inhibition affect enzyme activity?

    A competitive inhibitor binds the active site, competing with substrate and reducing enzyme activity.

  • How does noncompetitive inhibition affect enzyme activity?

    A noncompetitive inhibitor binds away from the active site, changing enzyme shape and reducing activity.