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General Biology: Introduction to Metabolism

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  • What is metabolism?

    Metabolism is the totality of an organism's chemical reactions, arising from orderly molecular interactions.

  • What are metabolic pathways?

    Metabolic pathways begin with a specific molecule and end with a product, with each step catalyzed by a specific enzyme.

  • Difference between catabolic and anabolic pathways

    Catabolic pathways release energy by breaking down complex molecules; anabolic pathways consume energy to build complex molecules.

  • Define bioenergetics

    Bioenergetics is the study of how energy flows through living organisms.

  • What is kinetic energy and thermal energy?

    Kinetic energy is energy of motion; thermal energy is kinetic energy from random movement of atoms or molecules.

  • What is potential energy and chemical energy?

    Potential energy is energy due to location or structure; chemical energy is potential energy available for release in chemical reactions.

  • First law of thermodynamics

    Energy can be transferred and transformed but cannot be created or destroyed; total energy of the universe is constant.

  • Second law of thermodynamics

    Every energy transfer or transformation increases the entropy (disorder) of the universe.

  • What is entropy?

    Entropy is a measure of molecular disorder or energy dispersal in a system.

  • How do organisms maintain order despite the second law of thermodynamics?

    Organisms create ordered structures but increase the total entropy of the universe by releasing heat and less ordered forms of matter.

  • What is free energy (G)?

    Free energy is the portion of a system's energy that can perform work at uniform temperature and pressure.

  • What does a negative ΔG indicate?

    A negative \(\Delta G\) means the reaction is spontaneous and can perform work.

  • What is chemical equilibrium?

    At equilibrium, forward and reverse reactions occur at the same rate; the system is at maximum stability and no net work is done.

  • Why are cells not at equilibrium?

    Cells are open systems with constant material flow, preventing equilibrium and allowing metabolism to proceed.

  • Difference between exergonic and endergonic reactions

    Exergonic reactions release energy and are spontaneous (negative ΔG); endergonic reactions absorb energy and are nonspontaneous (positive ΔG).

  • How does ATP power cellular work?

    ATP hydrolysis releases energy used to drive endergonic reactions by transferring a phosphate group (phosphorylation).

  • Structure of ATP

    ATP consists of ribose sugar, adenine base, and three phosphate groups linked in a chain.

  • What happens during ATP hydrolysis?

    ATP is hydrolyzed to ADP and inorganic phosphate, releasing energy due to the chemical change to a lower free energy state.

  • What is enzyme specificity?

    Enzymes are specific to substrates due to the shape of their active site, forming an enzyme-substrate complex.

  • How do enzymes lower activation energy?

    Enzymes lower activation energy by orienting substrates, straining bonds, and providing a favorable microenvironment.

  • What factors affect enzyme activity?

    Temperature, pH, substrate concentration, and cofactors influence enzyme activity; each enzyme has optimal conditions.

  • What are cofactors and coenzymes?

    Cofactors are nonprotein helpers; coenzymes are organic cofactors, often derived from vitamins.

  • What is allosteric regulation?

    Allosteric regulation occurs when a molecule binds to a site other than the active site, altering enzyme activity.

  • Explain feedback inhibition

    Feedback inhibition is when the end product of a metabolic pathway inhibits an earlier enzyme to prevent overproduction.