General Biology: Organic Chemistry and Energy Molecules
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Organic compounds are molecules primarily made of carbon atoms bonded to hydrogen, oxygen, nitrogen, or other elements, forming the basis of life.
Isomers are molecules with the same molecular formula but different structural arrangements.
The main types are structural isomers (different connectivity) and stereoisomers (same connectivity, different spatial arrangement).
A functional group is a specific group of atoms within a molecule that determines its chemical properties and reactions.
Examples include hydroxyl (-OH) (polar, forms hydrogen bonds), carboxyl (-COOH) (acidic), amino (-NH2) (basic), and phosphate (-PO4) (energy transfer).
Hydrocarbons are organic molecules consisting entirely of carbon and hydrogen atoms, often serving as energy sources.
Saturated hydrocarbons have only single bonds; unsaturated hydrocarbons contain one or more double or triple bonds.
ATP (adenosine triphosphate) is the primary energy carrier in cells, storing and transferring energy for cellular processes.
ADP (adenosine diphosphate) is the lower-energy molecule formed when ATP loses one phosphate group during energy release.
Energy is released when the bond between the second and third phosphate groups in ATP is broken, converting ATP to ADP and inorganic phosphate.
Functional groups determine the chemical behavior and interactions of biological molecules, affecting solubility, reactivity, and bonding.
Butane and isobutane are structural isomers; both have the formula C4H10 but different carbon chain arrangements.
Stereoisomers can have different biological activities because their 3D shapes affect how they interact with enzymes and receptors.
Alkanes follow the formula \(C_nH_{2n+2}\), where n is the number of carbon atoms.
Because it stores and provides energy for many cellular functions through reversible phosphate bond hydrolysis.
ADP can be recycled back into ATP by adding a phosphate group during cellular respiration or photosynthesis.
Polar functional groups like hydroxyl increase molecule polarity, affecting solubility and interactions with water.
The phosphate groups store potential energy in their bonds, which is released when broken.
Cis isomers have similar groups on the same side of a double bond; trans isomers have them on opposite sides.
Hydrocarbons serve as energy-rich molecules and structural components in lipids and other biomolecules.