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Microbiology: Bacterial Structure and Function

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  • What are the basic shapes of bacterial cells?

    Cocci (spherical), Rods or Bacilli (elongated), Vibrios (comma-shaped), Spirilla (rigid spirals), and Spirochetes (flexible spirals).

  • What determines the arrangement of cocci bacteria?

    Arrangement depends on the plane of cell division and whether cells separate. Examples include Diplococci (pairs), Streptococci (chains), Staphylococci (clusters), Tetrads (groups of 4), and Sarcina (cubic packets of 8).

  • What is the typical size range of bacterial cells?

    Bacteria range from about 0.3 μm (smallest like Mycoplasma) to very large cells like Epulopiscium fishelsoni (~600 μm by 80 μm). Average bacteria like E. coli are 1.1 to 1.5 μm wide and 2 to 6 μm long.

  • Why do bacterial cells favor a high surface area-to-volume ratio?

    A high surface area-to-volume ratio increases efficiency of nutrient uptake and diffusion within the cell, enhancing metabolic activity.

  • What are the main components of the bacterial cell envelope?

    The cell envelope includes the plasma membrane, cell wall, and sometimes an outer layer such as a capsule or slime layer.

  • What is the structure and function of the bacterial plasma membrane?

    A thin (7-8 nm) bilayer of amphipathic phospholipids with embedded proteins. It acts as a selectively permeable barrier controlling nutrient uptake, waste elimination, and environmental sensing.

  • What are hopanoids and their role in bacterial membranes?

    Hopanoids are hydrophobic molecules similar to cholesterol that stabilize membrane fluidity and form microdomains for protein complexes.

  • Differentiate macronutrients, micronutrients, and growth factors in bacteria.

    Macronutrients are needed in large amounts (e.g., carbon, nitrogen). Micronutrients are trace elements (e.g., zinc, manganese). Growth factors are organic compounds like amino acids and vitamins that bacteria cannot synthesize.

  • What are the main mechanisms bacteria use to uptake nutrients?

    Mechanisms include passive diffusion, facilitated diffusion, primary and secondary active transport, and group translocation. Endocytosis occurs only in eukaryotes.

  • Describe primary active transport in bacteria.

    Energy from ATP hydrolysis moves substances against concentration gradients via carrier proteins like ATP-binding cassette (ABC) transporters, important for vitamins, ions, and sugars uptake.

  • How do bacteria overcome the challenge of iron uptake?

    Bacteria secrete siderophores that bind insoluble ferric iron (Fe3+), forming complexes that are transported into the cell via specific receptors and ABC transporters.

  • What is group translocation in bacterial nutrient uptake?

    An energy-dependent process where the transported molecule is chemically modified during uptake, e.g., the phosphoenolpyruvate:sugar phosphotransferase system (PTS) phosphorylates sugars as they enter.

  • What is peptidoglycan and its role in bacterial cell walls?

    Peptidoglycan is a rigid, mesh-like polymer of sugars (NAG and NAM) and amino acids forming the sacculus that maintains cell shape and protects against osmotic stress.

  • Compare Gram-positive and Gram-negative bacterial cell walls.

    Gram-positive have thick peptidoglycan layers with teichoic acids and a single membrane (monoderm). Gram-negative have thin peptidoglycan, an outer membrane with lipopolysaccharides (LPS), and a periplasmic space (diderm).

  • What is the function of lipopolysaccharide (LPS) in Gram-negative bacteria?

    LPS contributes to negative surface charge, stabilizes the outer membrane, acts as a permeability barrier, and its lipid A portion functions as an endotoxin causing septic shock.

  • How does the bacterial cell wall protect against osmotic stress?

    The cell wall prevents lysis in hypotonic environments by resisting swelling and protects the cell when water moves in or out, maintaining structural integrity.

  • What happens to bacteria treated with lysozyme or penicillin in hypotonic solutions?

    Lysozyme breaks glycosidic bonds in peptidoglycan; penicillin inhibits its synthesis. Both cause cell lysis in hypotonic environments due to loss of cell wall integrity.

  • What are bacterial extracellular vesicles (EVs) and their functions?

    Small membrane-bound particles released from membranes; they transfer genetic material, toxins, and interact with other cells, aiding in communication and pathogenesis.

  • What are capsules, slime layers, and S-layers in bacteria?

    Capsules are well-organized polysaccharide layers protecting against phagocytosis. Slime layers are diffuse and easily removed. S-layers are protein arrays protecting from environmental stress and aiding adhesion.

  • What is the bacterial cytoskeleton and its functions?

    Protein filaments homologous to eukaryotic actin and tubulin that maintain cell shape, localize proteins, and participate in cell division.

  • What are bacterial inclusions and microcompartments?

    Inclusions are aggregates of stored substances (organic/inorganic). Microcompartments are protein shells enclosing enzymes, e.g., carboxysomes for CO2 fixation.

  • Describe the bacterial nucleoid and plasmids.

    The nucleoid contains the single circular chromosome compacted by supercoiling. Plasmids are small, extrachromosomal DNA molecules that replicate independently and can carry advantageous genes.

  • What are pili and flagella in bacteria?

    Pili are short protein appendages for attachment and DNA transfer. Flagella are long, whip-like structures for motility with distinct arrangements like monotrichous or peritrichous.

  • How do bacteria move using flagella?

    Flagella rotate like propellers; counterclockwise rotation causes forward runs, clockwise causes tumbling to reorient. Energy comes from proton motive force or ATP.

  • What is chemotaxis in bacteria?

    Movement toward chemical attractants or away from repellents by altering run and tumble frequency based on chemical gradients detected by chemoreceptors.

  • What are bacterial endospores and their significance?

    Dormant, highly resistant structures formed by some bacteria (e.g., Bacillus, Clostridium) to survive harsh conditions. Important in food safety and disease due to their resistance and longevity.

  • Describe the structure of a bacterial endospore.

    Consists of a core with DNA and ribosomes, surrounded by a cortex of thick peptidoglycan, a protein spore coat, and sometimes an exosporium outer layer.

  • Outline the stages of endospore formation (sporulation).

    DNA replication, asymmetric cell division forming forespore and mother cell, engulfment, cortex and coat formation, dehydration, and mother cell lysis releasing mature endospore.

  • What contributes to the resistance of bacterial endospores?

    Low water content, high calcium-dipicolinic acid, protective spore coat, impermeable inner membrane, DNA-binding proteins, and low pH stabilize and protect the spore.

  • What are the stages of endospore germination and outgrowth?

    Activation prepares spores, germination involves rehydration and cortex breakdown triggered by germinant receptors, and outgrowth is emergence of a vegetative cell.