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Ch. 24 - Amino Acids, Peptides, and Proteins
Wade - Organic Chemistry 9th Edition
Wade9th EditionOrganic ChemistryISBN: 9780135213728Non è quello che usi tu?Cambia libro di testo
Capitolo 24, Problema 19c

Draw the structure of the phenylthiohydantoin derivatives of
(c) lysine.

Guida verificata passo dopo passo
1
Understand the context: Phenylthiohydantoin (PTH) derivatives are formed during Edman degradation, a method used to sequence amino acids in peptides. The process involves reacting the amino group of an amino acid with phenyl isothiocyanate (PITC) to form a PTH derivative.
Identify the structure of lysine: Lysine is an amino acid with the structure H₂N-(CH₂)₄-CH(NH₂)-COOH. It has two amino groups: one on the α-carbon (α-amino group) and one on the side chain (ε-amino group).
Determine which amino group reacts: In the context of forming a PTH derivative, the α-amino group reacts with phenyl isothiocyanate (PITC) to form the PTH derivative. The ε-amino group on the side chain remains unreacted.
Draw the reaction: The α-amino group of lysine reacts with PITC to form a cyclic structure. The reaction involves the nucleophilic attack of the α-amino group on the carbon of the isothiocyanate group (-N=C=S) in PITC, followed by cyclization to form the PTH derivative.
Complete the structure: The final structure of the PTH derivative of lysine will include the phenylthiohydantoin ring attached to the α-carbon of lysine, with the side chain (CH₂)₄-NH₂ intact. Ensure the stereochemistry at the α-carbon is preserved if specified.

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Phenylthiohydantoin (PTH) Derivatives

Phenylthiohydantoin derivatives are compounds formed by the reaction of phenylthiohydantoin with amino acids. This reaction typically involves the formation of a stable derivative that can be used for amino acid analysis, particularly in sequencing. The PTH group allows for the identification of the amino acid by chromatographic methods.
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Ammonia Derivatives

Amino Acid Structure

Amino acids are organic compounds that serve as the building blocks of proteins. Each amino acid consists of a central carbon atom bonded to an amino group, a carboxyl group, a hydrogen atom, and a variable side chain (R group). The side chain determines the specific properties and identity of the amino acid, such as lysine, which has a positively charged side chain at physiological pH.
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Charged Amino Acids

Lysine

Lysine is an essential amino acid characterized by its aliphatic side chain containing an amino group, making it positively charged at physiological pH. It plays a crucial role in protein synthesis and is involved in various biological processes, including enzyme function and hormone production. Understanding lysine's structure is vital for drawing its PTH derivative accurately.
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Predicting Predominant Form of Lysine