Isotopes are atoms with different numbers of neutrons; ions are atoms that have gained or lost electrons.
Compare covalent and ionic bonds.
Covalent bonds share electrons and are strong; ionic bonds are electrostatic attractions between charged ions.
What are hydrogen bonds and van der Waals forces?
Hydrogen bonds are weak attractions between H and O, N, or F; van der Waals forces are weak, nonspecific attractions.
Define hydrophilic and hydrophobic molecules.
Hydrophilic molecules are polar or ionic and dissolve in water; hydrophobic molecules are nonpolar and do not dissolve in water.
How does pH relate to hydrogen ion concentration?
pH measures H+ concentration: pH < 7 is acidic, pH > 7 is alkaline (basic).
What is the role of buffers in biological systems?
Buffers, like bicarbonate, moderate changes in pH by absorbing or releasing H+ ions.
List major protein functions.
Proteins function as enzymes, membrane transporters, signal molecules, receptors, binding proteins, immunoglobulins, and regulatory proteins.
What is the induced-fit model of protein binding?
Proteins change shape to fit ligands specifically, enhancing binding and function.
Name factors that affect protein binding and activity.
Factors include isoforms, activation (proteolytic, cofactors), chemical modulators (inhibitors, allosteric), and physical modulators (temperature, pH).
How do competitive and irreversible inhibitors differ?
Competitive inhibitors compete with ligands at binding sites; irreversible inhibitors bind permanently and block activity.
What happens to proteins at extreme pH or temperature?
Proteins can denature, losing their shape and function.
How does protein concentration affect reaction rate?
Reaction rate increases with protein or ligand concentration until saturation is reached.