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General Biology: Basic Chemistry and Water Properties

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  • Define matter, atom, ion, molecule, and compound

    Matter is anything that has mass and takes up space. An atom is the smallest unit of an element. An ion is an atom or molecule with a charge. A molecule is two or more atoms bonded together. A compound is a molecule made of different elements.

  • Parts of an atom (name, location, charges)

    Protons are positive and in the nucleus, neutrons have no charge and are in the nucleus, electrons are negative and orbit the nucleus.

  • Information from the periodic table

    The periodic table shows atomic number (protons), atomic mass (protons + neutrons), and electronegativity (atom's ability to attract electrons).

  • Define emergent properties with examples

    Emergent properties arise from interactions of parts, not present in individual parts alone. Example: water's ability to moderate temperature emerges from hydrogen bonding.

  • Define essential elements and name the 4 main ones

    Essential elements are required for life. The four main ones are carbon (C), hydrogen (H), oxygen (O), and nitrogen (N).

  • Describe atomic number and mass number

    Atomic number is the number of protons. Mass number is the sum of protons and neutrons in the nucleus.

  • What are valence electrons and why are they important?

    Valence electrons are electrons in the outer shell; they determine an atom's chemical reactivity and bonding.

  • Describe the 3 chemical bonds discussed

    Ionic bonds transfer electrons, covalent bonds share electrons, and hydrogen bonds are weak attractions between polar molecules.

  • Define electronegativity

    Electronegativity is an atom's ability to attract shared electrons in a bond.

  • Why do most atoms want to react with each other?

    Atoms react to fill their outer electron shells and achieve a stable electron configuration.

  • Explain the polarity of water

    Water is polar because oxygen is more electronegative than hydrogen, creating partial charges.

  • Define cohesion, adhesion, and surface tension

    Cohesion is water molecules sticking to each other, adhesion is water sticking to other surfaces, and surface tension is the resistance of water's surface to breaking.

  • How does water moderate temperature and relate to specific heat?

    Water has a high specific heat, so it absorbs/releases heat slowly, stabilizing temperatures.

  • Why does ice float on water?

    Ice is less dense than liquid water because hydrogen bonds form a lattice that spaces molecules apart.

  • Differentiate solution, solvent, and solute

    A solution is a homogeneous mixture, the solvent dissolves the solute, and the solute is dissolved.

  • Define hydrophobic and hydrophilic

    Hydrophobic molecules repel water (nonpolar), hydrophilic molecules attract water (polar or charged).

  • Define acid, base, and explain pH scale

    Acids increase hydrogen ion concentration, bases decrease it. pH scale measures acidity; lower pH means more H+.

  • Define buffer and how it works

    Buffers resist pH changes by accepting or donating H+ ions to maintain stability.

  • What determines if a molecule is hydrophilic or hydrophobic?

    Presence of polar covalent bonds makes molecules hydrophilic; nonpolar covalent bonds make them hydrophobic.

  • What does it mean if a molecule has both hydrophilic and hydrophobic parts?

    It has both polar and nonpolar covalent bonds, often forming amphipathic molecules with distinct regions.

  • Number of valence electrons for major atoms in organic molecules

    Carbon has 4, hydrogen 1, oxygen 6, and nitrogen 5 valence electrons.

  • Define hydrocarbons and their biological importance

    Hydrocarbons are molecules of only carbon and hydrogen; they store energy and form the backbone of organic molecules.

  • What are functional groups and why are they important?

    Functional groups are specific groups of atoms that give organic molecules distinct properties and reactivity.