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General Biology: Cell Structure, Membranes, and Signaling

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  • Differences between prokaryotic and eukaryotic cells

    Prokaryotes lack a membrane-bound nucleus and organelles; DNA is in a nucleoid. Eukaryotes have a nucleus and membrane-bound organelles. Bacteria have peptidoglycan cell walls; archaea and eukaryotes do not.

  • How does cell size affect surface-area-to-volume ratio?

    Surface area increases with the square of cell length, volume with the cube. Larger cells have a lower surface-area-to-volume ratio, reducing exchange efficiency.

  • Function of the nuclear envelope and nuclear pores

    The nuclear envelope separates nucleus from cytoplasm with two membranes; nuclear pores regulate RNA, protein, and ribosomal subunit movement.

  • Role of the nucleolus

    The nucleolus synthesizes and processes ribosomal RNA and assembles ribosomal subunits for export through nuclear pores.

  • Difference between free and bound ribosomes

    Free ribosomes make proteins for the cytosol; bound ribosomes on rough ER make proteins for secretion or membranes. Targeting depends on protein signals, not ribosome type.

  • Evidence supporting endosymbiotic origin of mitochondria and chloroplasts

    They have their own DNA, bacterial-like ribosomes, divide by binary fission, and have double membranes, indicating bacterial ancestry.

  • Components of the endomembrane system

    Includes nuclear envelope, ER, Golgi apparatus, endosomes, lysosomes, vesicles, vacuoles, and plasma membrane involved in membrane trafficking.

  • Functions of rough and smooth ER

    Rough ER synthesizes and processes secreted and membrane proteins; smooth ER synthesizes lipids, detoxifies, and stores calcium.

  • Pathway of a secreted protein from synthesis to secretion

    Ribosome on rough ER → ER lumen → ER exit vesicles → Golgi cis face → Golgi trans face → secretory vesicles → exocytosis.

  • Role of lysosomes

    Lysosomes contain acid hydrolases that digest macromolecules and worn cellular components; defects cause substrate accumulation (e.g., Tay–Sachs disease).

  • Functions of microtubules

    Microtubules support organelle transport, spindle formation, and cilia/flagella movement; dynamic assembly/disassembly moves chromosomes during division.

  • Role of actin microfilaments

    Actin filaments maintain cell shape, enable muscle contraction with myosin, cytoplasmic streaming, and form the contractile ring in cytokinesis.

  • Structure and function of eukaryotic cilia and flagella

    Contain a 9 + 2 microtubule arrangement; dynein motors use ATP to slide microtubules, causing bending; basal bodies anchor them.

  • Fluid mosaic model of membranes

    Membranes are phospholipid bilayers with embedded proteins that move laterally; hydrophilic heads face out, hydrophobic tails face in.

  • Factors affecting membrane fluidity

    Unsaturated fatty acids increase fluidity; saturated tails decrease it. Cholesterol buffers fluidity by restraining movement at high temps and preventing solidification at low temps.

  • Difference between simple diffusion and facilitated diffusion

    Simple diffusion passes small nonpolar molecules through the bilayer; facilitated diffusion uses transport proteins for ions and polar molecules without energy.

  • Primary vs. secondary active transport

    Primary uses ATP directly to move substances against gradients; secondary uses downhill movement of one solute to drive uphill transport of another.

  • Function of the sodium–potassium ATPase

    Moves 3 Na⁺ out and 2 K⁺ in per ATP hydrolyzed, creating an electrogenic effect contributing to membrane potential.

  • Types of endocytosis

    Phagocytosis engulfs large particles; pinocytosis internalizes fluid nonselectively; receptor-mediated endocytosis selectively concentrates cargo via receptors.

  • Steps in cell signal transduction

    Reception: ligand binds receptor; transduction: signal relayed inside cell; response: cellular activity changes.

  • Mechanism of G protein-coupled receptors (GPCRs)

    Ligand binding causes GDP-GTP exchange on G protein, activating it to regulate effectors; GTP hydrolysis returns it to inactive state.

  • Activation of receptor tyrosine kinases (RTKs)

    Ligand binding induces receptor dimerization and tyrosine phosphorylation, recruiting proteins to initiate downstream signaling.

  • Role of second messengers

    Small molecules like cAMP, Ca²⁺, IP₃ relay and amplify signals inside the cell from activated receptors.

  • How IP₃ and calcium mediate signaling

    IP₃ opens ER calcium channels, releasing Ca²⁺ into cytosol; Ca²⁺ and diacylglycerol activate protein kinase C and other targets.

  • How phosphorylation regulates signaling pathways

    Protein kinases add phosphate groups to activate or inhibit proteins; phosphatases remove them to reset signaling.

  • Membrane protein types

    Integral proteins embed in the bilayer; transmembrane proteins span it; peripheral proteins associate with membrane surfaces.

  • How membrane carbohydrates contribute to cell function

    Carbohydrate chains on glycoproteins and glycolipids project outward and aid in cell recognition.

  • Why smaller cells or folded membranes improve exchange

    They increase surface area relative to volume, enhancing nutrient uptake and waste removal efficiency.