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General Biology: Key Concepts from Chapters 1-3

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  • Unifying themes of biology

    IThere are 5 unifying themes 

    1. Organization

    2. Information

    3. Energy and Matter

    4. Interactions

    5. Evolution 

  • Link between structure and function

    The shape or structure of a biological component determines its specific function.

    • Analyzing a biological structure gives us clues about what it does and how it works

  • Emergent properties

    New properties that arise at each level of biological organization

    ex: a single molecule does not create life, molecules, atoms and cells work toegther to create life

  • Positive feedback loop

    positive feedback, in which an end product speeds up its own production

    example breast feeding, hormones increase milk production

  • Negative feedback loop

    Negative feedback, in which the response reduces the initial stimulus

    Example: blood sugar control- when you eat, your sugar goes up; then your body produces insulin, and glucose is stored

  • Central dogma of biology

    Describes the flow of genetic information: DNA → RNA → Protein.

    dna to rna transcription

    rna to protein translation

  • Steps of the scientific method

    in any order: forming and testing hypotheses, exploration and discovery, societal benefits and outcomes, and community analysis and feedback

  • Hypothesis

    an explanation, based on observations and assumptions, that leads to a testable prediction

    A good hypothesis has a clear set of what will be tested and what the result will be, a good hypothesis will be testable, falsifiable, specific, unbiased, financially okay, explainable, and ethical

  • Components of a scientific argument

    Claim, evidence, and justification

  • Independent variable

    is the one that is manipulated by the researchers

  • Dependent variable

    is the one predicted to be affected in response

  • Positive control

    A group in an experiment where a known response is expected, ensuring the experiment works.

  • Negative control

    A group where no response is expected, used to detect contamination or bias.

  • Element

     A substance that cannot be broken down to other substances by chemical reactions

  • Molecule vs Compound

    • Acompound is a substance consisting of two or more elements in a fixed ratio

      • A compound has characteristics (emergent properties) different from those of its elements

  • Essential elements

    Elements required for life, e.g., carbon, hydrogen, oxygen, nitrogen.

  • Trace elements

    Elements required in very small amounts, e.g., iron, iodine.

  • Atomic number

    • Atomic number is the number of protons in its nucleus

  • Atomic mass

    • Atomic mass, the atom’s total mass, can be approximated by the mass number

  • Isotope

    • Isotopes are two atoms of an element that differ in the number of neutrons

  • Valence electron

    • Valence electrons are those in the outermost shell, or valence shell

  • Electronegativity

    • Electronegativity is an atom’s attraction for the electrons in a covalent bond

      • The more electronegative an atom is, the more strongly it pulls shared electrons toward itself

  • Cation vs Anion


    Cation: positively charged ion; Anion: negatively charged ion.

  • Covalent bond

    A chemical bond formed by sharing electron pairs between atoms.

  • Ionic bond

    giving up of electrons. Ionic bonds are the complete sharing of electrons through a complete transfer from an

  • Hydrogen bond

    • A hydrogen bond forms when a hydrogen atom covalently bonded to one electronegative atom is also attracted to another electronegative atom

  • Nonpolar vs Polar covalent bonds

    Nonpolar: electrons shared equally; Polar: electrons shared unequally due to electronegativity differences.

  • Chemical reaction

    • Chemical reactions are the making and breaking of chemical bonds

    • The starting molecules of a chemical reaction are called reactants

    • The resulting molecules of a chemical reaction are called products

  • Chemical equilibrium

    • Chemical equilibrium is reached when the forward and reverse reactions occur at the same rate 

  • Hydrogen bonding in water

    • In the water molecule, the electrons of the polar covalent bonds spend more time near the oxygen than the hydrogen

    • The water molecule is thus a polar molecule; the overall charge is unevenly distributed

    • Polarity allows water molecules to form hydrogen bonds with each other

  • Four properties of water important to life

    1. Cohesion of Water

    1. Moderation of Temperature by Water

    1. Floating of Ice on Liquid Water

    1. Water is the Solvent of Life

  • Van der Waal


    • Van der Waals interactions are attractions between molecules that are close together as a result of these charges

      • weak, short-range electrostatic attractions between neutral atoms or molecules, caused by temporary shifts in electron density that create fleeting, opposite charges

  • Cohesion


    • Cohesion – hydrogen bonding among water molecules

      • Cohesion contributes to the transport of water and dissolved nutrients against gravity in plants

  • Adhesion


    • Adhesion - between different substances

      • Ex: water and plant cell walls

      • This helps to counter the downward pull of gravity

  • Transpiration


    • The combination of both allows for transpiration to occur (driving force that moves water from the roots to the leaves against gravity).

  • Surface tension


    • Surface tension is a measure of how hard it is to break the surface of a liquid

    • Water has an unusually high surface tension due to hydrogen bonding

  • Calorie (cal)


    • A calorie (cal) is the amount of heat required to raise the temperature of 1 g of water by 1°C

      • It is also the amount of heat released when 1 g of water cools by 1ºC

  • Heat of vaporization


    • Heat of vaporization is the heat a liquid must absorb for 1 g to be converted to gas

  • Single Covalent Bond


    • A single covalent bond, or single bond, is the sharing of one pair of valence electrons

    • shown by the - symbol H:H and H-H

  • Double Covalent Bond


    A double covalent bond, or double bond, is the sharing of two pairs of valence electrons

    • shown by the symbol O=O

  • Elctronegativity relates to Covalent Bonds


    • Electronegativity is an atom’s attraction for the electrons in a covalent bond

      • The more electronegative an atom is, the more strongly it pulls shared electrons toward itself

  • How is electronegativity determined


    Factors that influence electronegativity:

    • Nuclear charge (higher # protons exert stronger pull on electrons)

    • Atomic radius (smaller atoms have higher electronegativity b/c nucleus is closer to the shared electrons)

  • Matter


    • Organisms are composed of matter

    • Matter is anything that takes up space and has mass

    • Matter is made up of elements 

  • Electron orbital


    • An orbital is the three-dimensional space where an electron is found 90% of the time

    • Each electron shell can contain a limited number of electrons. the first shell has two and each other can have up to 8 electrons

  • How are living things classified


    • Each species is given a two-part name: The genus, to which the species belongs, and a species name unique to that species

    • E.g., Homo sapiens, is the name of our species

  • Theme 1 Organization


    Life can be studied at different levels, from molecules to the entire living planet. That's organization; everything in biology is connected through systems

    Reductionism is an approach that reduces complex systems to simple components that are manageable to study

  • Theme 2 Information


    Everything is encoded in DNA Central dogma of biology

  • Theme 3 Energy and Matter


    • When organisms use energy , it is lost to the surroundings as heat

    • As a result, energy flows through an ecosystem, usually entering as light and exiting as heat

    • Chemicals cycle within an ecosystem, where they are used and then recycled

    • producers consumers and decomposers

  • Theme 4 Interactions


    • Interactions between the components of the system ensure smooth integration of all the parts

    • This holds true equally well for molecules in a cell and the components of an ecosystem

  • Theme 5 Evolution


    Explains how all living things are unified and diverse. 

    Evolution is the process of change that transforms life on earth from its earliest beginnings evolution is the fundamental organizing principle of biology.