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Basic Principles of Chemistry for Anatomy & Physiology

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Basic Principles of Chemistry as They Apply to Body Processes

Introduction

Chemistry forms the foundation of all physiological reactions in the human body, including movement, digestion, heart function, and nervous system activity. Understanding basic chemistry is essential for comprehending the molecular and cellular processes that sustain life.

Key Terms Related to Basic Chemistry

Elements and Atoms

All matter is composed of elements, which are substances that cannot be broken down into simpler substances by ordinary chemical methods. The human body is primarily made up of four elements: carbon, oxygen, hydrogen, and nitrogen. Elements are made up of atoms, the smallest particles of an element that retain its properties.

  • Atoms: Unique building blocks for each element; give elements their physical and chemical properties.

  • Molecules: Two or more atoms bonded together (e.g., O2).

  • Compounds: Molecules with two or more different kinds of atoms bonded together (e.g., H2O).

Classification of Elements and Compounds

Molecules and Compounds

Most atoms combine to form molecules and compounds. Molecules may consist of one type of atom (e.g., O2) or different types (e.g., C6H12O6).

Mixtures

Most matter exists as mixtures, which are physical combinations of two or more components. There are three basic types of mixtures:

  • Solutions: Homogeneous mixtures with evenly distributed particles.

  • Colloids: Heterogeneous mixtures with larger particles that do not settle out.

  • Suspensions: Heterogeneous mixtures with large, visible solutes that settle out.

Types of Mixtures: Solution, Colloid, Suspension

Differences Between Mixtures and Compounds

  • Mixtures do not involve chemical bonding; compounds do.

  • Mixtures can be separated by physical means; compounds require breaking chemical bonds.

  • Mixtures can be heterogeneous or homogeneous; compounds are always homogeneous.

Chemical Reactions

Types of Chemical Reactions

Chemical reactions occur when chemical bonds are formed, rearranged, or broken. The main types are:

  • Synthesis (Combination) Reactions: Atoms or molecules combine to form larger, more complex molecules.

  • Decomposition Reactions: Molecules are broken down into smaller molecules or atoms.

  • Exchange (Displacement) Reactions: Bonds are both made and broken; parts of reactants are exchanged.

Types of Chemical Reactions: Synthesis, Decomposition, Exchange

Oxygen is required for decomposition reactions that release energy; carbon dioxide is produced as a waste product and helps maintain acid-base balance.

Energy in Chemical Reactions

  • Exergonic Reactions: Release energy.

  • Endergonic Reactions: Absorb energy.

  • Reaction speed is affected by temperature, concentration, particle size, and catalysts (enzymes).

Organic and Inorganic Chemistry

Biochemistry Overview

Biochemistry studies the chemical composition and reactions of living matter. Body chemicals are classified as organic (contain carbon, made by living things) or inorganic (do not contain carbon, e.g., water, salts, acids, bases).

Inorganic Compounds

Water

  • Most abundant inorganic compound in living material (60–80% of cell volume).

  • High heat capacity and heat of vaporization; helps regulate body temperature.

  • Excellent solvent; major transport medium for nutrients, gases, and wastes.

  • Important reactant and provides cushioning for organs.

Salts

  • Ionic compounds that dissociate in water to form ions.

  • Vital for nerve impulse transmission, muscle contraction, and enzyme activity.

Acids and Bases

  • Acids: Release hydrogen ions (H+); increase solution acidity.

  • Bases: Accept hydrogen ions; increase solution alkalinity.

  • Measured in pH units: pH 7 is neutral, below 7 is acidic, above 7 is alkaline.

Acids and BasespH Scale and Examples

Homeostasis of acid-base balance is regulated by kidneys, lungs, and chemical buffers.

Organic Compounds

Carbohydrates

Carbohydrates are sugars and starches that provide a ready source of cellular fuel. They are classified by size and solubility:

  • Monosaccharides: Simple sugars (glucose, fructose, galactose, deoxyribose, ribose).

  • Disaccharides: Two linked monosaccharides (sucrose, maltose, lactose).

  • Polysaccharides: Polymers of simple sugars (starch, glycogen, cellulose).

Monosaccharides and DisaccharidesPolysaccharides: Glycogen Structure

Starch is the storage carbohydrate in plants; glycogen is the storage carbohydrate in animals, mainly in skeletal muscle and liver.

Lipids

Lipids are insoluble in water and include triglycerides, phospholipids, steroids, and other substances. They are important for energy storage, insulation, and protection.

  • Triglycerides: Fats and oils; composed of fatty acids and glycerol in a 3:1 ratio.

  • Phospholipids: Modified triglycerides with two fatty acid tails (hydrophobic) and a polar head (hydrophilic); chief building material for cellular membranes.

  • Steroids: Fat-soluble molecules; cholesterol is essential for cell membranes, vitamin D, steroid hormones, and bile salts.

Triglyceride StructureTriglyceride SynthesisPhospholipid Structure and Membrane Formation

Proteins

Proteins are the basic structural material of the body and play vital roles in cell function. They are composed of amino acids and have four structural levels: primary, secondary, tertiary, and quaternary.

  • Fibrous proteins: Structural, insoluble, and stable (e.g., collagen).

  • Globular proteins: Functional, water-soluble, and chemically active (e.g., enzymes, antibodies, hormones).

Nucleic Acids

Nucleic acids (DNA and RNA) are composed of carbon, oxygen, hydrogen, nitrogen, and phosphorus. DNA is found in the nucleus and provides instructions for protein synthesis and cell replication. RNA is involved in protein synthesis.

  • DNA: Replicates itself before cell division; provides instructions for building proteins.

  • RNA: Functions in protein synthesis.

Summary Table: Types of Mixtures

Type

Particle Size

Settling

Example

Solution

Very tiny

Do not settle out

Mineral water

Colloid

Larger

Do not settle out

Jell-O

Suspension

Very large

Settle out

Blood

Summary Table: Types of Chemical Reactions

Type

Description

Example

Synthesis

Atoms/molecules combine to form larger molecules

Protein synthesis from amino acids

Decomposition

Molecules broken down into smaller molecules/atoms

Glycogen breakdown to glucose

Exchange

Bonds made and broken; parts exchanged

ATP transfers phosphate to glucose

Key Equations

  • Acid dissociation:

  • Base dissociation:

  • Neutralization:

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