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Chemical Foundation of Life: Atoms and Elements

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Chemical Foundation of Life: Atoms and Elements

Atoms and Elements

Atoms: The Smallest Building Blocks of Life

  • Atom: The smallest unit of matter that retains all chemical properties of an element.

  • Matter is anything that occupies space and has mass.

  • Atoms are composed of sub-atomic particles: protons, neutrons, and electrons.

Elements: Unique Forms of Matter

  • Element: A substance that cannot be broken down into smaller substances by chemical means.

  • Each element has specific chemical and physical properties.

  • Elements are designated by chemical symbols (e.g., Sulfur = S, Calcium = Ca).

Elements Essential for Life

Although the elements that make up living organisms are not unique, they occur in unique proportions compared to the non-living world.

Element

Life (Humans)

Atmosphere

Earth's Crust

Oxygen (O)

65%

21%

46%

Carbon (C)

18%

trace

trace

Hydrogen (H)

10%

trace

0.1%

Nitrogen (N)

3%

78%

trace

Comparing the elements of living organisms to the non-living world

Elements in the Human Body

Element

Symbol

Percentage of Body Mass (including water)

Oxygen

O

65.0%

Carbon

C

18.5%

Hydrogen

H

9.5%

Nitrogen

N

3.3%

Calcium

Ca

1.5%

Phosphorus

P

1.0%

Potassium

K

0.4%

Sulfur

S

0.3%

Sodium

Na

0.2%

Chlorine

Cl

0.2%

Magnesium

Mg

0.1%

  • About 25% of the 92 natural elements are essential for life.

  • Trace elements (less than 0.01% of mass) are also required in small quantities (e.g., Boron, Chromium, Iron, Zinc).

Structure of the Atom

Sub-Atomic Particles

  • Proton: Positively charged particle located in the nucleus.

  • Neutron: Neutral particle located in the nucleus.

  • Electron: Negatively charged particle located in orbitals around the nucleus.

Particle

Charge

Mass (amu)

Location

Proton

+1

1

nucleus

Neutron

0

1

nucleus

Electron

-1

0

orbitals

Atomic Structure

  • The nucleus contains protons and neutrons.

  • Electrons are found in orbitals surrounding the nucleus, forming an electron cloud.

  • Atoms are electrically neutral when the number of protons equals the number of electrons.

Example: Helium (He) atom has 2 protons, 2 neutrons, and 2 electrons.

Atomic Number and Atomic Mass

Definitions and Calculations

  • Atomic Number: The number of protons in the nucleus of an atom. It defines the element.

  • Atomic Mass: The total mass of an atom, approximately equal to the sum of protons and neutrons.

  • Electrons have negligible mass and are not included in atomic mass calculations.

  • Atomic mass is expressed in atomic mass units (amu).

  • Number of neutrons can be calculated as:

Example: Carbon (C) has atomic number 6. Carbon-12 has 6 protons and 6 neutrons; Carbon-13 has 6 protons and 7 neutrons.

Isotopes

Definition and Applications

  • Isotopes: Atoms of the same element with different numbers of neutrons, resulting in different mass numbers.

  • All isotopes of an element have the same number of protons but may differ in neutrons.

  • Radioactive isotopes decay spontaneously, emitting particles and energy.

  • Applications include dating fossils, tracing atoms in metabolic processes, and diagnosing medical disorders.

Example: Hydrogen has three isotopes: Protium (), Deuterium (), and Tritium ().

Electron Shells and Chemical Properties

Electron Arrangement

  • Electrons occupy energy levels or shells around the nucleus.

  • The valence shell is the outermost electron shell.

  • Atoms are most stable when their valence shell is full.

  • Elements in Group 18 (noble gases) have full valence shells and are chemically inert.

Sub-Atomic Particle Properties Table

Particle

Charge

Mass (amu)

Location

Proton

+1

1

Nucleus

Neutron

0

1

Nucleus

Electron

-1

0

Orbitals

Additional info:

  • Quantum mechanics describes electron orbitals as regions of space where electrons are likely to be found, rather than fixed paths.

  • Chemical reactions involve changes in the distribution of electrons between atoms, forming new substances.

  • Molecules are formed when atoms share or transfer electrons through chemical bonds (covalent, ionic, hydrogen, van der Waals).

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