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The Chemistry of Life: Elements, Atoms, and Measurement in Biology

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Chemistry of Life

Introduction to the Chemistry of Life

Understanding the chemistry of life is fundamental to biology. Living organisms are composed of matter, which is made up of chemical elements. These elements combine to form compounds that are essential for life processes.

Basic Laboratory Equipment and Measurements

Metric System in Biology

The metric system is the standard system of measurement in science, including biology. It provides a universal language for scientists to communicate data accurately.

Measures

Instrument

Unit

Length

Ruler/Meter Stick

[m] Meters

Mass

Balance Beam

[g] Grams

Volume

Graduated Cylinder

[L] Liters

Volume

Ruler 3D

[cm3] Cubic Centimeters

Temp.

Thermometer

[°C] Celsius

Metric system table for length, mass, volume, and temperature

Measuring Volume

Volume is commonly measured in liters (L) or milliliters (mL) using a graduated cylinder or beaker. Accurate measurement requires reading the bottom of the meniscus at eye level.

  • 1 liter (L) = 1000 milliliters (mL)

  • 1 fluid ounce = 29.57 milliliters (mL)

Graduated cylinder for measuring liquid volumeBeaker for measuring liquid volume

Measuring Mass

Mass is measured in grams (g) using a balance beam. For larger quantities, kilograms (kg) are used, where 1 kg = 1000 g. Mass can also be converted to ounces (oz).

  • 1 kilogram (kg) = 1000 grams (g)

  • 1 ounce (oz) = 28.35 grams (g)

Balance beam for measuring mass

Measuring Temperature

Temperature in biology is measured in degrees Celsius (°C) using a thermometer. To convert Celsius to Fahrenheit (°F), use the following formula:

  • Degrees F = (Degrees C × 9/5) + 32

Thermometer for measuring temperature

Elements, Atoms, and Compounds

Essential Elements for Life

About 25 elements are essential for human life. Four elements—oxygen (O), carbon (C), hydrogen (H), and nitrogen (N)—make up about 96% of the weight of most living organisms. Trace elements are required in small amounts to prevent disease.

  • Oxygen (O): 65%

  • Carbon (C): 18.5%

  • Hydrogen (H): 9.5%

  • Nitrogen (N): 3.3%

  • Other elements include calcium, phosphorus, potassium, sulfur, sodium, chlorine, and magnesium.

Diagram showing the elemental composition of the human body

Atoms: Structure and Properties

An atom is the smallest unit of matter that retains the properties of an element. Atoms are composed of three subatomic particles:

  • Protons (positively charged, found in the nucleus)

  • Neutrons (neutral, found in the nucleus)

  • Electrons (negatively charged, orbit the nucleus)

Diagram of an atom showing protons, neutrons, and electrons

Atomic Number, Mass Number, and Isotopes

The atomic number is the number of protons in an atom. The mass number is the sum of protons and neutrons. Isotopes are atoms of the same element with different numbers of neutrons.

Carbon-12

Carbon-13

Carbon-14

Protons

6

6

6

Neutrons

6

7

8

Electrons

6

6

6

Mass Number

12

13

14

Table of isotopes of carbon

Radioactive Isotopes

Radioactive isotopes are unstable and emit radiation. They are useful as tracers in biological research and medicine but can also be hazardous.

  • Used in medical imaging and dating fossils

  • Can damage living tissue if not handled properly

Chemical Bonds and Molecules

Types of Chemical Bonds

The distribution of electrons in an atom determines its chemical properties and ability to form bonds. The main types of chemical bonds are:

  • Ionic Bonds: Formed when electrons are transferred from one atom to another, resulting in oppositely charged ions.

  • Covalent Bonds: Formed when two atoms share one or more pairs of electrons. Can be polar (unequal sharing) or nonpolar (equal sharing).

  • Hydrogen Bonds: Weak bonds important in the chemistry of life, especially in water and biological molecules like DNA.

Diagram of chemical bonds including ionic, covalent, and hydrogen bonds

Solubility and Polarity

Polarity refers to the distribution of electrical charge over the atoms joined by the bond. Polar molecules, like water, dissolve other polar substances, making water an excellent solvent for biological reactions.

Chemical Reactions

Chemical reactions involve breaking existing chemical bonds and forming new ones. For example, cellular respiration is a chemical reaction that converts glucose and oxygen into carbon dioxide and water:

Applications and Examples

Importance of Trace Elements

Trace elements such as iron, iodine, and fluoride are required in small amounts for proper physiological function. Deficiency can lead to diseases such as goiter (iodine deficiency).

Person with goiter due to iodine deficiencyFoods rich in trace elementsFluoride in toothpaste for dental health

Summary Table: Key Concepts in Chemistry of Life

Concept

Description

Element

Pure substance consisting of one type of atom

Atom

Smallest unit of an element

Isotope

Atoms of the same element with different numbers of neutrons

Ionic Bond

Bond formed by transfer of electrons

Covalent Bond

Bond formed by sharing of electrons

Hydrogen Bond

Weak bond important in water and biological molecules

Solvent

Substance that dissolves other substances (water is the universal solvent)

Additional info: The notes above expand on the provided content with definitions, examples, and context suitable for a General Biology college course, following the structure and requirements of introductory biology chapters on the chemical basis of life.

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