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Fundamental Chemistry and Cell Structure for General Biology

스터디 가이드 - 스마트 노트

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Introduction to Biology

Levels of Biological Organization

Biology studies life at multiple levels, from atoms and molecules to cells and organisms. Understanding these levels is essential for grasping how life functions.

  • Atoms: Basic units of matter, composed of protons, neutrons, and electrons.

  • Molecules: Groups of atoms bonded together, forming the chemical basis of life.

  • Organelles: Specialized structures within cells that perform distinct functions.

  • Cells: Fundamental units of life, capable of all life processes.

Chemistry

Atoms and Elements

Atoms are the smallest units of elements, which are pure substances consisting of only one type of atom. Elements are defined by their atomic number (number of protons).

  • Subatomic Particles: Protons (+1 charge), neutrons (0 charge), electrons (-1 charge).

  • Atomic Number: Number of protons in the nucleus; defines the element.

  • Mass Number: Sum of protons and neutrons.

Subatomic particles and their propertiesAtomic number and mass number for carbon

Electron Shells and Stability

Electrons occupy energy levels called shells. The chemical reactivity of an atom is determined by the electrons in its outermost (valence) shell.

  • Inner shell holds up to 2 electrons; second shell holds up to 8 electrons.

  • Atoms are most stable when their valence shell is full (octet rule).

Energy levels of electrons in an atomElectron shell diagramElectron shell diagram

Periodic Table and Elements in Biology

The periodic table organizes elements by atomic number and properties. Certain elements are especially abundant in living organisms.

  • Major elements: Oxygen, carbon, hydrogen, nitrogen.

  • Minor elements: Calcium, phosphorus, potassium, sulfur, sodium, chlorine, magnesium.

Table of elements and their abundance in the human bodyPeriodic table with electron shellsAbundance of elements in cells

Water

Structure of Water Molecule

Water is a vital molecule for life, composed of two hydrogen atoms and one oxygen atom. Its structure allows for unique properties such as cohesion, adhesion, and solvent abilities.

  • Chemical formula:

  • Polar molecule: Unequal sharing of electrons creates partial charges.

Structure of water molecule

Biomolecules

Major Biomolecules

Biomolecules are organic compounds essential for life, including proteins, lipids, carbohydrates, and nucleic acids.

  • Proteins: Made of amino acids; perform structural, enzymatic, and regulatory functions.

  • Lipids: Include fats, oils, and phospholipids; important for energy storage and membrane structure.

  • Carbohydrates: Sugars and starches; provide energy and structural support.

  • Nucleic acids: DNA and RNA; store and transmit genetic information.

Ingredients list showing amino acids, fatty acids, and sugarsEgg and its ingredient list

Cell Components

Structure of Eukaryotic Cells

Eukaryotic cells contain membrane-bound organelles, each with specialized functions. Understanding these components is crucial for cell biology.

  • Nucleus: Contains DNA; controls cell activities.

  • Mitochondria: Site of cellular respiration; produces ATP.

  • Endoplasmic Reticulum (ER): Synthesizes proteins and lipids.

  • Golgi Apparatus: Modifies, sorts, and packages proteins and lipids.

  • Lysosomes: Digest cellular waste.

  • Peroxisomes: Break down fatty acids and detoxify.

  • Transport Vesicles: Move materials within the cell.

Diagram of eukaryotic cell with labeled organelles

Chemical Bonds

Types of Chemical Bonds

Atoms interact to achieve stability by forming chemical bonds. The main types are ionic, covalent, and hydrogen bonds.

  • Ionic Bonds: Formed by transfer of electrons between atoms, resulting in charged ions.

  • Covalent Bonds: Formed by sharing electrons between atoms; can be polar or nonpolar.

  • Hydrogen Bonds: Weak interactions between molecules with polar covalent bonds.

Electron transfer and ionic bondingCovalent bonding models

Electronegativity and Bond Polarity

Electronegativity is the ability of an atom to attract shared electrons. Differences in electronegativity determine bond polarity.

  • Non-polar covalent bonds: Equal sharing of electrons.

  • Polar covalent bonds: Unequal sharing, resulting in partial charges (δ+ and δ-).

  • Ionic bonds: Large difference in electronegativity; electrons are transferred.

Bond polarity and electronegativity

Summary Table: Elements in the Human Body

Element

Symbol

Percentage of Body Mass

Oxygen

O

65.0%

Carbon

C

18.5%

Hydrogen

H

9.5%

Nitrogen

N

3.3%

Calcium

Ca

1.5%

Phosphorus

P

1.0%

Potassium

K

0.4%

Sulfur

S

0.3%

Sodium

Na

0.2%

Chlorine

Cl

0.2%

Magnesium

Mg

0.1%

Table of elements and their abundance in the human body

Additional info:

  • Biomolecules are composed of elements that follow the rules of chemical bonding and polarity, which are fundamental to their biological function.

  • Cellular structure and function are directly related to the chemical properties of the molecules that compose them.

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