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General Biology - Foundations and Key Concepts

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  • What determines if a covalent bond is polar or nonpolar?

    Unequal sharing of electrons creates a polar covalent bond with partial charges (δ+ and δ−). Equal sharing results in a nonpolar covalent bond.

  • Why is water unique in terms of hydrogen bonding?

    Each water molecule can form up to four hydrogen bonds (2 as donor, 2 as acceptor), giving it high cohesion, surface tension, and specific heat.

  • Why is the phospholipid bilayer selectively permeable?

    Polar molecules cannot pass the hydrophobic core formed by nonpolar tails; only nonpolar, small molecules cross freely by simple diffusion.

  • What happens to a saltwater organism placed in freshwater?

    Water enters the cells by osmosis in a hypotonic environment, causing the organism to swell and burst.

  • Consequences of a protein folding incorrectly?

    Protein may lose function, fail to reach correct location, cause diseases like prions, or fail to bind necessary molecules.

  • True or false: Nucleic acids have R groups like amino acids.

    False. Nucleic acids do not have R groups; only amino acids have R groups.

  • At what pH do lysosomal enzymes fold correctly?

    Lysosomal enzymes fold properly only at low pH (~4.5), the acidic environment inside lysosomes.

  • Why stain fimbriae to identify prokaryotes?

    Fimbriae are only found in prokaryotes, so staining them confirms prokaryotic presence.

  • What is homeoviscous adaptation in cold-water fish membranes?

    Fish synthesize more unsaturated phospholipids with kinked tails to maintain membrane fluidity at low temperatures.

  • Order of protein secretion pathway?

    Ribosome → Rough ER → Vesicle → Golgi apparatus → Vesicle → Cell exterior.

  • What is the main purpose of fermentation in cells?

    To oxidize NADH back to NAD⁺, allowing glycolysis to continue producing ATP without oxygen.

  • Where does the oxygen released in photosynthesis come from?

    Oxygen released comes from splitting water (H₂O), not from CO₂.

  • What is the role of the electron transport chain (ETC) in mitochondria and chloroplasts?

    ETC creates a proton (H⁺) gradient used by ATP synthase to produce ATP.

  • How does a G-protein coupled receptor (GPCR) activate a G-protein?

    GPCR activates a guanine nucleotide exchange factor (GEF) that exchanges GDP for GTP on the G-protein, turning it ON.

  • How is a signaling pathway turned OFF?

    A phosphatase removes phosphates from the receptor, deactivating the signal.

  • What does PIP₂ cleavage produce in cell signaling?

    PIP₂ is cleaved into DAG (membrane-bound) and IP₃ (releases Ca²⁺ from ER), diverging the signal into two pathways.

  • Difference between leading and lagging strand synthesis in DNA replication?

    Leading strand is synthesized continuously toward the replication fork; lagging strand is synthesized discontinuously away from the fork as Okazaki fragments.

  • Why do telomeres shorten with each cell division?

    Because DNA polymerase cannot fully replicate the 5' end of the lagging strand; insufficient telomerase activity causes shortening.

  • What is the function of cyclin-dependent kinases (Cdks)?

    Cdks, when bound to cyclins, form an active kinase complex that regulates cell cycle progression.

  • What causes genetic diversity during meiosis?

    Crossing over during prophase I and independent assortment during metaphase I.

  • How to distinguish autosomal from sex-linked inheritance from F1 data?

    Autosomal traits show equal phenotype ratios in males and females; sex-linked traits show different ratios between sexes.

  • How to calculate genetic map distance?

    Map distance (cM) = (number of recombinant offspring / total offspring) × 100.

  • How does RNA polymerase find the correct DNA strand to transcribe?

    General transcription factors bind to the core promoter and recruit RNA polymerase to the correct strand.

  • What is the start codon and what amino acid does it code for?

    Start codon is AUG, which codes for methionine (Met).

  • How does translation terminate at a stop codon?

    A protein release factor binds the A site and hydrolyzes the bond between the polypeptide and tRNA, releasing the protein.

  • What explains the large number of proteins compared to genes in humans?

    Alternative splicing allows one gene to produce multiple protein isoforms by including or excluding different exons.

  • What is a nonsense mutation?

    A mutation that creates a premature stop codon, resulting in a truncated protein.

  • What is an enhancer in gene regulation?

    A DNA sequence that can be located thousands of base pairs away and increases transcription when bound by transcription factors.

  • What are the conditions for Hardy-Weinberg equilibrium?

    No selection, random mating, no mutation, no migration, and large population size; allele frequencies remain constant.

  • What is genetic drift and its effect?

    Random changes in allele frequencies, stronger in small populations, can fix or eliminate alleles and reduce genetic variation.

  • What is the order of events in allopatric speciation?

    Geographic barrier formation → genetic divergence → reproductive isolation.