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LEC 14:Inhibitors, Alternative Pathways, and Regulation of Cellular Respiration

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Inhibitors of Cellular Respiration

Cyanide as an Irreversible Enzyme Inhibitor

Cyanide ions are potent inhibitors of cellular respiration, specifically targeting the electron transport chain in mitochondria. Cyanide binds irreversibly to the iron atoms in cytochrome c oxidase (Complex IV), halting electron flow and ATP synthesis.

  • Mechanism: Cyanide prevents electron transfer to oxygen, stopping the electron transport chain.

  • Consequences: No proton (H+) pumping, no ATP synthesis, and cellular energy failure.

  • Application: Hydrogen cyanide has been used as a lethal agent in gas chambers.

Gas chamber Toxic symbol for cyanide

Dinitrophenol (DNP) as an Uncoupler

Dinitrophenol (DNP) disrupts the mitochondrial inner membrane's impermeability to protons, uncoupling electron transport from ATP synthesis. This leads to increased metabolic rates and energy dissipation as heat.

  • Mechanism: DNP allows H+ to cross the membrane, preventing the formation of a proton gradient.

  • Effects: No ATP is produced (in extreme cases), but electron transport continues, and energy is released as heat.

  • Historical Note: DNP was once sold as a diet pill but was banned due to severe side effects, including cataracts, brain damage, and death.

DNP burner bottle

Alternative Metabolic Pathways and Oxygen Requirements

Oxygen and Cellular Respiration

Oxygen is essential for many organisms but can be toxic due to its reactivity. Organisms are classified based on their oxygen requirements:

  • Obligate Anaerobes: Cannot use O2; O2 is toxic (e.g., Clostridium botulinum).

  • Aerotolerant Anaerobes: Do not use O2 but tolerate its presence (e.g., Lactobacillus acidophilus).

  • Facultative Anaerobes: Can use O2 if available but can survive without it (e.g., brewer’s yeast).

  • Obligate Aerobes: Require O2 for survival (e.g., most multicellular organisms).

Alternative Pathways in the Absence of Oxygen

When oxygen is unavailable, organisms that rely on electron transport chains have two main options:

  1. Anaerobic Respiration: Some prokaryotes use alternative terminal electron acceptors (e.g., sulfate ions SO42-), producing H2S instead of H2O.

  2. Fermentation: ATP is generated via glycolysis, and NAD+ is regenerated by transferring electrons to organic molecules.

Fermentation Pathways

Alcohol Fermentation

Alcohol fermentation occurs in yeast and some bacteria, converting pyruvate to ethanol and CO2. This process is used in brewing, winemaking, and baking.

  • Key Steps: Pyruvate is decarboxylated to acetaldehyde, which is then reduced to ethanol.

  • Applications: Bread and alcoholic beverages are produced using this pathway.

Bread Beer

Lactic Acid Fermentation

Lactic acid fermentation reduces pyruvate to lactate using NADH, regenerating NAD+ without releasing CO2. This pathway is used by muscle cells during intense exercise and by certain bacteria and fungi in food production.

  • Key Steps: Pyruvate + NADH → Lactate + NAD+

  • Applications: Production of cheese and yogurt; energy generation in muscles when O2 is scarce.

Lactic acid fermentation pathway Yogurt with berries Cheese

Limitations of Fermentation

Not all cells can perform fermentation. For example, nerve cells in the brain lack the necessary enzymes and are highly sensitive to oxygen deprivation, leading to rapid cell death during events such as strokes.

Brain with stroke area highlighted

Metabolic Integration and Regulation

Entry of Other Nutrients into Cellular Respiration

Besides glucose, cells can metabolize proteins and fats for energy. These macromolecules are broken down into intermediates that enter glycolysis or the citric acid cycle.

  • Proteins: Broken down into amino acids, which are deaminated and enter the cycle as pyruvate, acetyl CoA, or other intermediates.

  • Fats: Glycerol enters glycolysis; fatty acids are converted to acetyl CoA via beta-oxidation.

  • Carbohydrates: Broken down into sugars that enter glycolysis.

Canada's Food Guide Balanced meal plate

Regulation of Glycolysis: Phosphofructokinase (PFK)

Phosphofructokinase (PFK) is a key regulatory enzyme in glycolysis. Its activity is modulated allosterically by cellular energy status:

  • Inhibition: High ATP or citrate levels inhibit PFK, slowing glycolysis when energy is abundant.

  • Stimulation: High AMP levels stimulate PFK, increasing glycolysis when energy is needed.

Allosteric sites on PFK

ATP, ADP, and AMP Interconversion

ATP is hydrolyzed to ADP and inorganic phosphate (Pi), and further to AMP and pyrophosphate (PPi). AMP accumulation signals low energy status, activating glycolysis.

ATP hydrolysis to ADP and AMP

Feedback Inhibition by Citrate

Citrate, the first product of the citric acid cycle, inhibits PFK when its concentration is high, signaling that the cell does not need to produce more ATP via glycolysis.

Citrate formation in the citric acid cycle

Cell Division: General Features

Overview of Cell Division

Cell division ensures the transmission of genetic material to daughter cells. In eukaryotes, the process is more complex due to larger genomes and multiple chromosomes. Both prokaryotic and eukaryotic cell division share common steps:

  • Reproductive Signal: Internal or external cues trigger cell division.

  • DNA Replication: Each daughter cell receives a complete copy of the genome.

  • DNA Segregation: Replicated DNA is distributed to new cells.

  • Cytokinesis: The cytoplasm divides, forming two new cells, each with its own membrane (and cell wall, if present).

Prokaryotic cell division Eukaryotic cell division Chromosome segregation Cytokinesis Cell division stages

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