IndietroBIO 121 Exam 2 Study Guide: Membrane Structure, Metabolism, Cellular Respiration, and Photosynthesis
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Plasma Membrane Structure and Function
Overview of the Plasma Membrane
The plasma membrane is a selectively permeable barrier found in all cells, separating the internal environment from the external surroundings. Its major functions include protection, communication, and regulation of transport.
Composition: Primarily composed of a phospholipid bilayer with embedded proteins, carbohydrates, and cholesterol.
Fluid Mosaic Model: Describes the membrane as a dynamic structure with proteins and lipids moving laterally within the bilayer.
Amphipathic Molecule: Phospholipids have both hydrophilic (water-loving) heads and hydrophobic (water-fearing) tails.
Membrane Fluidity
Membrane fluidity is influenced by temperature, cholesterol, and the saturation of fatty acid tails.
Temperature: Higher temperatures increase fluidity; lower temperatures decrease it.
Cholesterol: Acts as a fluidity buffer, preventing extremes in fluidity.
Saturated vs. Unsaturated Fatty Acids: Unsaturated tails (with double bonds) increase fluidity; saturated tails decrease it.
Membrane Proteins and Carbohydrates
Integral Proteins: Span the membrane; involved in transport and signaling.
Peripheral Proteins: Attached to the membrane surface; provide structural support.
Transport Proteins: Facilitate movement of substances across the membrane.
Receptor Proteins: Receive and transmit signals.
Glycoproteins & Glycolipids: Carbohydrates attached to proteins/lipids; important for cell recognition and signaling.
Selective Permeability and Transport
The plasma membrane allows some molecules to cross while blocking others.
Small, nonpolar molecules (e.g., O2, CO2) cross easily.
Large or charged molecules require transport proteins.
Passive Transport: Movement without energy input (diffusion, osmosis, facilitated diffusion).
Active Transport: Requires energy (ATP) to move substances against their concentration gradient.
Osmosis and Tonicity
Osmosis is the diffusion of water across a selectively permeable membrane.
Hypertonic Solution: Higher solute concentration outside; water leaves cell.
Hypotonic Solution: Lower solute concentration outside; water enters cell.
Isotonic Solution: Equal solute concentration; no net water movement.
Effects on Cells:
Animal Cells: Lyse (burst) in hypotonic, shrivel in hypertonic, normal in isotonic.
Plant Cells: Turgid (firm) in hypotonic, flaccid in isotonic, plasmolyzed in hypertonic.
Aquaporin: Specialized protein channel for rapid water transport.
Bulk Transport
Endocytosis: Cell takes in large particles by engulfing them.
Exocytosis: Cell expels materials by fusing vesicles with the membrane.
Cell Signaling
Cells communicate via signaling pathways involving ligands and receptors.
Signal Transduction Pathway: Series of steps converting a signal to a cellular response.
Types of Signaling:
Paracrine: Local signaling to nearby cells.
Synaptic: Neurotransmitter release at synapses.
Endocrine: Hormones travel through bloodstream to distant cells.
Direct Contact: Cells communicate via membrane-bound molecules.
Three Stages of Cell Signaling: Reception, transduction, response.
Ligand: Molecule that binds to a receptor to initiate signaling.
Responses: Can be changes in gene expression or cellular activity.
Metabolism and Enzyme Function
Metabolism Overview
Metabolism is the sum of all chemical reactions in a cell, organized into metabolic pathways.
Catabolic Pathways: Break down molecules, releasing energy (e.g., cellular respiration).
Anabolic Pathways: Build molecules, requiring energy (e.g., protein synthesis).
Energy Concepts
Kinetic Energy: Energy of motion.
Potential Energy: Stored energy due to position or structure.
Chemical Energy: Potential energy in chemical bonds.
Thermodynamics
First Law: Energy cannot be created or destroyed, only transformed.
Second Law: Every energy transfer increases entropy (disorder).
Entropy: Measure of disorder; increases with energy transformations.
Free Energy and Reactions
Free Energy (G): Energy available to do work.
Exergonic Reaction: Releases energy; spontaneous;
Endergonic Reaction: Requires energy; nonspontaneous;
Energy Coupling: Using exergonic reactions to drive endergonic ones.
ATP: Structure and Function
ATP (Adenosine Triphosphate): Main energy currency of the cell.
Hydrolysis of ATP: Releases energy by breaking a phosphate bond.
Phosphorylation: Addition of a phosphate group to a molecule.
ATP Regeneration:
Enzymes and Catalysis
Enzyme: Protein catalyst that speeds up reactions by lowering activation energy.
Activation Energy: Energy required to start a reaction.
Substrate: Reactant molecule acted upon by an enzyme.
Active Site: Region on enzyme where substrate binds.
Specificity: Enzymes are specific to their substrates.
Cofactors: Non-protein helpers (e.g., vitamins, minerals).
Competitive Inhibition: Inhibitor binds to active site, blocking substrate.
Noncompetitive Inhibition: Inhibitor binds elsewhere, changing enzyme shape.
Allosteric Regulation: Regulation by binding at a site other than the active site.
Denaturation: Loss of enzyme structure and function due to heat or pH.
Feedback Inhibition: End product inhibits pathway to regulate activity.
Cellular Respiration and Fermentation
Overview of Cellular Respiration
Cellular respiration is a catabolic pathway that breaks down glucose to produce ATP. It occurs in three main stages: glycolysis, citric acid cycle, and oxidative phosphorylation.
Fermentation: Anaerobic process producing ATP without oxygen.
Redox Reaction: Transfer of electrons; oxidation (loss), reduction (gain).
NADH: Electron carrier; stores energy for ATP production.
Stages of Cellular Respiration
Glycolysis: Occurs in cytoplasm; splits glucose into pyruvate; produces ATP and NADH.
Pyruvate Conversion: Pyruvate enters mitochondria, converted to Acetyl CoA.
Citric Acid Cycle: Occurs in mitochondrial matrix; Acetyl CoA combines with oxaloacetate to form citrate; produces NADH, FADH2, ATP.
Oxidative Phosphorylation: Occurs in cristae; electron transport chain and chemiosmosis produce most ATP.
Electron Transport Chain and Chemiosmosis
Electron Transport Chain: Series of proteins in membrane; electrons from NADH/FADH2 passed to oxygen.
ATP Synthase: Enzyme that uses proton gradient to make ATP.
Chemiosmosis: Movement of protons across membrane to drive ATP synthesis.
Role of Oxygen: Final electron acceptor; essential for aerobic respiration.
ATP Production
Substrate-level Phosphorylation: Direct transfer of phosphate to ADP.
Oxidative Phosphorylation: ATP produced via electron transport chain and chemiosmosis.
ATP Yield: Glycolysis (2 ATP), Citric Acid Cycle (2 ATP), Electron Transport Chain (~26-28 ATP).
Fermentation
Occurs when oxygen is absent.
Major Products: Lactic acid or ethanol, plus ATP.
Aerobic vs. Anaerobic: Aerobic uses oxygen; anaerobic does not.
Pyruvate: Central intermediate; can enter respiration or fermentation pathways.
Regulation of Cellular Respiration
ATP and NADH levels regulate pathway via feedback inhibition.
Carbohydrates, fats, and proteins can all be used to produce ATP.
Photosynthesis
Types of Organisms
Autotrophs: Produce their own food.
Photoautotrophs: Use light energy (e.g., plants).
Chemoautotrophs: Use chemical energy.
Heterotrophs: Consume other organisms for energy.
Chloroplast Structure
Chlorophyll: Main pigment for photosynthesis.
Stomata: Openings for gas exchange.
Mesophyll Cells: Contain chloroplasts.
Stroma: Fluid inside chloroplast.
Thylakoid Membranes: Site of light reactions.
Grana: Stacks of thylakoids.
Photosynthesis Equation
Basic chemical equation:
Light Reactions
Location: Thylakoid membranes.
Inputs: Light, water, NADP+, ADP.
Outputs: Oxygen, ATP, NADPH.
Provides ATP and NADPH to Calvin Cycle.
Color and Pigments
Chlorophyll absorbs blue and red light; reflects green.
Absorption spectra: Shows wavelengths absorbed.
Action spectra: Shows effectiveness of wavelengths for photosynthesis.
Photosystems
Photosystem I and II: Involved in light reactions; transfer electrons and produce ATP/NADPH.
Calvin Cycle
Location: Stroma.
Inputs: CO2, ATP, NADPH.
Outputs: Glucose, ADP, NADP+.
Three Phases: Carbon fixation, reduction, regeneration.
Key Enzyme: Rubisco.
Photorespiration and Plant Types
Photorespiration: Rubisco binds O2 instead of CO2; wastes energy.
C3 Plants: Standard pathway; susceptible to photorespiration.
C4 Plants: Spatial separation; PEP carboxylase minimizes photorespiration.
CAM Plants: Temporal separation; open stomata at night to minimize water loss.
Affinity: Strength of enzyme binding to substrate.
Comparison of C3, C4, and CAM Plants
Plant Type | Photorespiration | Adaptation | Key Enzyme |
|---|---|---|---|
C3 | High | None | Rubisco |
C4 | Low | Spatial separation | PEP Carboxylase |
CAM | Low | Temporal separation | PEP Carboxylase |
Spatial separation: C4 plants fix CO2 in different cells. Temporal separation: CAM plants fix CO2 at different times.