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Ch.16 Amino Acids, Proteins, and Enzymes
Timberlake - Chemistry: An Introduction to General, Organic, and Biological Chemistry 13th Edition
Timberlake13th EditionChemistry: An Introduction to General, Organic, and Biological ChemistryISBN: 9780134421353Non è quello che usi tu?Cambia libro di testo
Capitolo 16, Problema 81c

Consider the amino acids lysine, valine, and aspartate in an enzyme. State which of these amino acids have R groups that would:
c. form hydrogen bonds

Guida verificata passo dopo passo
1
Identify the R groups (side chains) of the given amino acids: lysine, valine, and aspartate. Lysine has an amino group (-NH3+) in its side chain, valine has a branched alkyl group, and aspartate has a carboxyl group (-COO−) in its side chain.
Recall the conditions for hydrogen bonding: Hydrogen bonds form between a hydrogen atom covalently bonded to an electronegative atom (like O, N, or F) and another electronegative atom with a lone pair of electrons.
Analyze the R group of lysine. The amino group (-NH3+) in lysine's side chain can participate in hydrogen bonding because nitrogen is electronegative and can interact with hydrogen bond acceptors or donors.
Analyze the R group of valine. The branched alkyl group in valine is nonpolar and lacks electronegative atoms, so it cannot form hydrogen bonds.
Analyze the R group of aspartate. The carboxyl group (-COO−) in aspartate's side chain contains oxygen atoms, which are electronegative and can act as hydrogen bond acceptors, allowing aspartate to form hydrogen bonds.

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Amino Acid Structure

Amino acids are organic compounds that serve as the building blocks of proteins. Each amino acid consists of a central carbon atom, an amino group, a carboxyl group, a hydrogen atom, and a variable R group (side chain). The R group determines the unique properties of each amino acid, influencing how they interact with each other and with other molecules.
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Amino Acid Catabolism: Amino Group Example 2

Hydrogen Bonding

Hydrogen bonds are weak attractions that occur between a hydrogen atom covalently bonded to an electronegative atom and another electronegative atom. In the context of amino acids, R groups that contain polar functional groups, such as hydroxyl (-OH) or amine (-NH2) groups, can participate in hydrogen bonding, which is crucial for protein structure and function.
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Hydrogenation Reactions Concept 1

Polarity of R Groups

The polarity of an amino acid's R group affects its ability to form hydrogen bonds. Polar R groups, which have uneven distribution of electrical charge, can interact with water and other polar molecules, facilitating hydrogen bond formation. In contrast, nonpolar R groups do not engage in hydrogen bonding, impacting the overall behavior of proteins in biological systems.
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Molecular Polarity (Simplified) Concept 1