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The Cellular Level of Organization: Structure and Function of Cells

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Chapter 3: The Cellular Level of Organization

Cell Theory and Introduction to Cells

Cell theory is a foundational concept in biology, stating that all living organisms are composed of cells, which arise from the division of preexisting cells. Cells are the smallest units capable of performing all vital physiological functions, and each cell maintains homeostasis at the cellular level.

  • Cytology: The study of cells, a branch of cell biology.

  • Somatic cells: All body cells except sex cells; undergo mitosis.

  • Sex cells (germ cells): Sperm in males and oocytes in females; undergo meiosis.

3-1 Plasma Membrane

Structure and Function of the Plasma Membrane

The plasma membrane, also known as the cell membrane, separates the cytoplasm from the extracellular fluid and is essential for maintaining cellular integrity and function.

  • Extracellular fluid (interstitial fluid): Watery medium surrounding the cell; about 1/3 of body fluid.

  • Intracellular fluid (cytoplasm): Fluid inside the cell; about 2/3 of body fluid.

  • Functions of the plasma membrane:

    • Physical isolation (barrier)

    • Regulation of exchange with the environment (ions, nutrients, wastes)

    • Sensitivity to the environment (chemical signals, extracellular fluid composition)

    • Structural support (anchors cells and tissues)

Membrane Lipids: The Phospholipid Bilayer

The plasma membrane is primarily composed of a phospholipid bilayer, which forms a barrier to ions and water-soluble compounds.

  • Hydrophilic heads: Face outward toward watery environments.

  • Hydrophobic fatty-acid tails: Face inward, away from water.

Phospholipid bilayer structure

Membrane Proteins

Membrane proteins are critical for the diverse functions of the plasma membrane.

  • Integral proteins: Embedded within the membrane.

  • Peripheral proteins: Bound to the inner or outer surface.

  • Types of membrane proteins:

    • Anchoring proteins: Attach to structures inside or outside the cell.

    • Recognition proteins: Label cells as normal or abnormal.

    • Enzymes: Catalyze reactions.

    • Receptor proteins: Bind and respond to ligands (e.g., hormones).

    • Carrier proteins: Transport specific solutes across the membrane.

    • Channels: Regulate water flow and solute passage; may be gated.

Plasma membrane with proteins and glycocalyx

Membrane Carbohydrates: The Glycocalyx

Carbohydrates on the cell surface form the glycocalyx, a sticky "sugar coat" composed of proteoglycans, glycoproteins, and glycolipids.

  • Functions of the glycocalyx:

    • Lubrication and protection

    • Anchoring and locomotion

    • Specificity in binding (receptors)

    • Recognition (immune response)

3-2 Organelles within the Cytoplasm

Cytoplasm and Its Components

The cytoplasm includes all materials inside the cell, excluding the nucleus. It consists of cytosol (intracellular fluid), organelles, and inclusions.

  • Cytosol: Contains dissolved nutrients, ions, proteins, and waste products; high in protein and potassium.

  • Organelles: Structures with specific functions.

  • Inclusions: Masses of insoluble materials (e.g., glycogen, lipid droplets, melanin).

Types of Organelles

  • Nonmembranous organelles: Direct contact with cytosol (e.g., cytoskeleton, microvilli, centrioles, cilia, flagella, ribosomes, proteasomes).

  • Membranous organelles: Isolated from cytosol by a membrane (e.g., endoplasmic reticulum, Golgi apparatus, lysosomes, peroxisomes, mitochondria).

The Cytoskeleton

The cytoskeleton provides structural support, shape, and movement for the cell. It consists of microfilaments, intermediate filaments, and microtubules.

  • Microfilaments: Smallest, composed of actin; support cell shape.

  • Intermediate filaments: Provide strength and stabilize organelles.

  • Microtubules: Largest, form spindle apparatus during cell division.

Cytoskeleton structure in a cell

Microvilli, Cilia, and Flagella

These cell surface structures are specialized for movement and increasing surface area.

  • Microvilli: Increase surface area for absorption (e.g., in the small intestine); attached to cytoskeleton via microfilaments.

  • Cilia: Motile extensions that move fluids across the cell surface; found in respiratory and reproductive tracts.

  • Flagella: Whip-like extension for cell movement; present only in sperm cells.

Cell with microvilli, cilia, and internal organelles Structure of a centriole (9+0 microtubule array)

Ribosomes and Proteasomes

  • Ribosomes: Organelles that synthesize proteins; composed of rRNA and proteins. Free ribosomes produce proteins for the cytosol, while fixed ribosomes (on rough ER) produce proteins for secretion or membrane insertion.

  • Proteasomes: Contain proteases for breaking down damaged or abnormal proteins.

Membranous Organelles

  • Endoplasmic Reticulum (ER): Network of membranes with cisternae; involved in synthesis, storage, transport, and detoxification.

    • Smooth ER (SER): Synthesizes lipids and carbohydrates.

    • Rough ER (RER): Surface covered with ribosomes; synthesizes proteins and glycoproteins.

  • Golgi Apparatus: Modifies, packages, and sorts proteins and lipids for secretion or delivery to other organelles.

  • Lysosomes: Vesicles containing digestive enzymes; break down waste, bacteria, and damaged organelles.

  • Peroxisomes: Vesicles with enzymes that break down fatty acids and neutralize hydrogen peroxide.

  • Mitochondria: Produce ATP through aerobic metabolism; have a double membrane with inner folds (cristae).

3-3 Cell Nucleus

Structure and Function of the Nucleus

The nucleus is the largest organelle and serves as the cell's control center. It is surrounded by a double membrane (nuclear envelope) with nuclear pores for communication.

  • Nucleolus: Site of rRNA synthesis and ribosome assembly.

  • Chromatin: Loosely coiled DNA in non-dividing cells; condenses into chromosomes during cell division.

  • Genetic code: DNA sequence that determines protein structure; organized into genes (functional units of heredity).

3-4 Protein Synthesis

Gene Expression: Transcription and Translation

Protein synthesis is the process by which cells build proteins based on genetic instructions.

  • Transcription: DNA is used as a template to synthesize messenger RNA (mRNA).

  • RNA processing: Introns are removed, and exons are spliced together before mRNA exits the nucleus.

  • Translation: mRNA binds to ribosomes in the cytoplasm, where transfer RNA (tRNA) brings amino acids to build the polypeptide chain according to the mRNA codons.

DNA Triplet

Coding Strand

mRNA Codon

tRNA Anticodon

Amino Acid

AAA

TTT

UUU

AAA

Phenylalanine

AAT

TTA

UUA

AAU

Leucine

ACA

TGT

UGU

ACA

Cysteine

CAA

GTT

GUU

CAA

Valine

TAC

ATG

AUG

UAC

Methionine

TCG

AGC

AGC

UCG

Serine

GCG

CGC

CGC

GCG

Proline

CGG

GCC

GCC

CGG

Alanine

Examples of the genetic code table

3-5 Diffusion and Osmosis

Membrane Transport Mechanisms

The plasma membrane is selectively permeable, allowing some substances to pass while restricting others. Transport can be passive (no energy required) or active (requires energy).

  • Diffusion: Movement of molecules from high to low concentration (down a concentration gradient).

  • Osmosis: Diffusion of water across a selectively permeable membrane toward higher solute concentration.

Diffusion of a solute in water

Factors Affecting Diffusion

  • Distance, molecular size, temperature, concentration gradient, and electrical forces.

Types of Diffusion Across Plasma Membranes

  • Simple diffusion: Direct passage of lipid-soluble molecules and gases through the membrane.

  • Channel-mediated diffusion: Passage of water-soluble compounds and ions through protein channels.

Diffusion across the plasma membrane

Osmolarity and Tonicity

  • Osmolarity: Total solute concentration in a solution (mOsM).

  • Tonicity: Effect of a solution on cell volume (isotonic, hypotonic, hypertonic).

  • Isotonic: No net water movement; cell remains unchanged.

  • Hypotonic: Water enters cell; cell may swell and burst (hemolysis).

  • Hypertonic: Water leaves cell; cell shrinks (crenation).

Red blood cell in isotonic solution Red blood cell in hypotonic solution Red blood cell in hypertonic solution

3-6 Carrier-Mediated and Vesicular Transport

Carrier-Mediated Transport

  • Facilitated diffusion: Passive transport of large molecules (e.g., glucose, amino acids) via carrier proteins.

  • Active transport: Movement of substances against their concentration gradient using energy (ATP); includes ion pumps and exchange pumps (e.g., sodium-potassium pump).

Facilitated diffusion of glucose Sodium-potassium exchange pump

Vesicular Transport

  • Endocytosis: Import of extracellular materials via vesicles (includes receptor-mediated endocytosis, pinocytosis, phagocytosis).

  • Exocytosis: Export of materials from the cell as vesicles fuse with the plasma membrane.

3-8 Cell Life Cycle

Cell Division

  • Mitosis: Produces two identical diploid daughter cells (46 chromosomes each).

  • Meiosis: Produces four unique haploid gametes (23 chromosomes each).

  • Interphase: Nondividing period; includes G0, G1, S, and G2 phases.

  • M phase: Mitosis (prophase, metaphase, anaphase, telophase) and cytokinesis (division of cytoplasm).

Cellular Differentiation

All cells contain the same genetic material but differentiate by turning off specific genes, leading to specialized cell functions (e.g., liver cells, neurons).

3-10 Cell Division and Cancer

Tumors and Cancer

  • Benign tumor: Contained, not life-threatening unless large.

  • Malignant tumor (cancer): Life-threatening due to metastasis (spread to other tissues).

  • Mutagens: Agents that cause mutations leading to cancer.

Summary Table: Types of Membrane Transport

Type

Energy Required?

Direction

Example

Simple Diffusion

No

High to Low

O2, CO2

Facilitated Diffusion

No

High to Low

Glucose

Active Transport

Yes (ATP)

Low to High

Na+/K+ pump

Osmosis

No

Water: High to Low

Water movement

Endocytosis/Exocytosis

Yes (ATP)

Bulk transport

Phagocytosis

Additional info: This guide covers the essential concepts of cell structure, membrane transport, organelles, protein synthesis, and cell division, providing a foundation for further study in Anatomy & Physiology.

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