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The Chemistry of Life: Foundations for Anatomy & Physiology

스터디 가이드 - 스마트 노트

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The Chemistry of Life

Introduction to Chemistry in Anatomy & Physiology

Chemistry forms the basis for understanding the structure and function of the human body. The study of matter, atoms, and their interactions is essential for comprehending physiological processes.

The Chemistry of Life chapter title and DNA illustration

Matter and Atomic Structure

Definition and States of Matter

Matter is anything that has mass and occupies space, existing as solids, liquids, or gases. Chemistry is the study of matter and its interactions. The atom is the smallest unit of matter retaining its original properties.

Subatomic Particles

Atoms are composed of three main subatomic particles:

  • Protons (p+): Positively charged, found in the nucleus.

  • Neutrons (n0): No charge, slightly larger than protons, found in the nucleus.

  • Electrons (e-): Negatively charged, found in electron shells surrounding the nucleus.

Atoms are electrically neutral when the number of protons equals the number of electrons.

Structure of a carbon atom showing nucleus and electron shells

Electron Shells

Electrons occupy regions called electron shells around the nucleus. The first shell holds 2 electrons, the second holds 8.

Elements and Isotopes

Elements in the Human Body

An element is a substance that cannot be broken down by chemical means. The atomic number (number of protons) defines each element. The human body is primarily composed of hydrogen, oxygen, carbon, and nitrogen, along with mineral and trace elements.

Isotopes and Radioactivity

Isotopes are atoms of the same element with different numbers of neutrons, resulting in different mass numbers. Radioisotopes are unstable isotopes that release energy or radiation during radioactive decay.

Hydrogen isotopes: Hydrogen, Deuterium, Tritium

Nuclear Medicine Applications

Radioisotopes are used in medical imaging and treatment, such as cancer radiation therapy and thyroid disorder treatments.

Medical imaging using radioisotopes

Mixtures and Solutions

Types of Mixtures

Matter can be physically combined to form mixtures. There are three main types:

  • Suspensions: Large, unevenly distributed particles that settle out (e.g., blood).

  • Colloids: Small, evenly distributed particles that do not settle out (e.g., milk).

  • Solutions: Extremely small, evenly distributed particles; solute dissolved in solvent (e.g., glucose in water).

Suspension: blood with settled red blood cellsColloid: milk proteins in waterSolution: glucose dissolved in water

Chemical Bonds and Molecules

Types of Chemical Bonds

Chemical bonds are energy relationships between atoms, not physical structures. They include:

  • Ionic Bonds: Electrons are transferred from a metal to a nonmetal, forming cations and anions (e.g., NaCl).

  • Covalent Bonds: Electrons are shared between nonmetals. Can be single, double, or triple bonds.

Formation of an ionic bond: sodium and chloride

Electron Sharing in Covalent Bonds

Covalent bonds can involve sharing one, two, or three pairs of electrons. The octet rule states that atoms are most stable with 8 electrons in their valence shell.

Number of Electron Pairs Shared

Molecular Structure

Structural Formula

Molecular Formula

One (single bond)

H2

H-H

H2

Two (double bond)

O2

O=O

O2

Three (triple bond)

N2

N≡N

N2

Table of electron sharing in covalent bonds

Polar and Nonpolar Covalent Bonds

Nonpolar covalent bonds occur when atoms share electrons equally. Polar covalent bonds occur when atoms with different electronegativities share electrons unequally, creating dipoles.

Polar covalent bond in water

Hydrogen Bonds

Hydrogen bonds are weak attractions between the partially positive end of one dipole and the partially negative end of another. They are responsible for water's surface tension.

Hydrogen bonds between water molecules

Chemical Reactions and Energy

Types of Chemical Reactions

Three fundamental types of reactions maintain homeostasis:

  • Catabolic (Decomposition) Reactions: Break down large substances into smaller ones.

  • Exchange Reactions: Atoms are exchanged between reactants.

  • Anabolic (Synthesis) Reactions: Build larger molecules from smaller subunits.

Energy in Chemical Reactions

Potential energy is stored and can be released to do work. Kinetic energy is energy in motion. Chemical reactions require activation energy to proceed.

Potential and kinetic energy illustrationActivation energy graphActivation energy analogy with a ball on a hill

Enzymes and Reaction Rates

Enzymes are biological catalysts that lower activation energy, increasing reaction rates. Factors affecting reaction rates include concentration, temperature, particle size, and phase.

Effect of enzymes on activation energy

Biochemistry: Inorganic and Organic Compounds

Water

Water is the primary solvent in the body, with high heat capacity, cushioning, and lubricating properties. It dissolves hydrophilic (charged) solutes but not hydrophobic (uncharged) solutes.

Hydrophilic molecules in waterHydrophobic molecules in water

Acids, Bases, and pH

Acids release H+ ions in water, increasing acidity. Bases bind H+ ions, decreasing acidity. The pH scale measures hydrogen ion concentration, ranging from 0 (acidic) to 14 (basic).

Behavior of acids and bases in waterThe pH scale

Salts and Electrolytes

Salts are formed from metal cations and nonmetal anions held by ionic bonds. When dissolved in water, they form electrolytes capable of conducting electrical current.

Ionic compounds are hydrophilic

Organic Molecules: Carbohydrates, Lipids, Proteins, and Nucleic Acids

Monomers and Polymers

Organic compounds are polymers built from monomer subunits. Dehydration synthesis links monomers, forming water. Hydrolysis breaks polymers into monomers using water.

Carbohydrates

Carbohydrates are composed of carbon, hydrogen, and oxygen. They function as fuel and have structural roles. Types include:

  • Monosaccharides: Simple sugars (glucose, fructose).

  • Disaccharides: Two monosaccharides joined by dehydration synthesis.

  • Polysaccharides: Many monosaccharides joined together (e.g., glycogen, starch).

Monosaccharides and disaccharides

Lipids

Lipids are hydrophobic molecules composed mainly of carbon and hydrogen. Types include:

  • Saturated fatty acids: No double bonds, solid at room temperature.

  • Monounsaturated fatty acids: One double bond, liquid at room temperature.

  • Polyunsaturated fatty acids: Two or more double bonds, liquid at room temperature.

  • Triglycerides: Three fatty acids linked to glycerol, storage form of fat.

Saturated fatty acid structurePolyunsaturated fatty acid structureTriglyceride structure and formation

Summary Table: Types of Chemical Bonds

Bond Type

Formation

Example

Strength

Ionic

Transfer of electrons

NaCl

Moderate

Covalent

Sharing of electrons

H2, O2, N2

Strong

Hydrogen

Attraction between dipoles

Water molecules

Weak

Example: Water's unique properties, such as surface tension and solvent ability, are due to hydrogen bonding and polarity.

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