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General Biology Study Guide: Units 1–4 (Scientific Inquiry, Chemistry of Life, Macromolecules, Cell Structure & Function, Metabolism, and Enzymes)

Study Guide - Smart Notes

Tailored notes based on your materials, expanded with key definitions, examples, and context.

Scientific Inquiry and the Nature of Biology

Quantitative vs. Qualitative Data

  • Quantitative data: Numerical measurements (e.g., mass, volume, temperature).

  • Qualitative data: Descriptive observations (e.g., color, texture, behavior).

Hypotheses and Scientific Method

  • Hypothesis: A testable statement that explains an observation or answers a question.

  • Null hypothesis: States there is no effect or difference.

  • Control group: The group not exposed to the experimental variable; used for comparison.

  • Independent variable: The factor manipulated by the experimenter.

  • Dependent variable: The factor measured in the experiment.

  • Standard deviation: A measure of data spread around the mean.

Experimental Design

  • Good experiments include controls, replication, and randomization.

  • Data analysis often involves calculating averages, standard deviation, and using statistical tests.

Chemical Context of Life

Atoms, Elements, and Bonds

  • Atoms: Basic units of matter, composed of protons, neutrons, and electrons.

  • Elements: Substances consisting of one type of atom (e.g., C, H, O, N).

  • Covalent bonds: Atoms share electrons (e.g., H2O).

  • Ionic bonds: Transfer of electrons from one atom to another (e.g., NaCl).

  • Hydrogen bonds: Weak attractions between polar molecules (e.g., between water molecules).

Water and Its Properties

  • Cohesion: Water molecules stick to each other (surface tension).

  • Adhesion: Water molecules stick to other substances.

  • High specific heat: Water resists temperature changes.

  • Solvent properties: Water dissolves many substances due to polarity.

pH and Buffers

  • pH: Measures hydrogen ion concentration;

  • Buffers: Substances that minimize changes in pH.

Carbon and the Molecular Diversity of Life

Organic Molecules and Functional Groups

  • Organic molecules: Contain carbon and hydrogen; form the basis of life.

  • Functional groups: Specific groups of atoms that confer properties (e.g., hydroxyl, carboxyl, amino, phosphate).

Macromolecules

  • Carbohydrates: Sugars and polymers of sugars (e.g., glucose, starch, cellulose).

  • Lipids: Hydrophobic molecules (e.g., fats, phospholipids, steroids).

  • Proteins: Polymers of amino acids; perform many cellular functions.

  • Nucleic acids: DNA and RNA; store and transmit genetic information.

Table: Major Macromolecules and Their Functions

Macromolecule

Monomer

Function

Example

Carbohydrate

Monosaccharide

Energy, structure

Glucose, cellulose

Lipid

Fatty acid, glycerol

Energy storage, membranes

Triglyceride, phospholipid

Protein

Amino acid

Catalysis, structure, transport

Enzyme, hemoglobin

Nucleic acid

Nucleotide

Genetic information

DNA, RNA

Cell Structure and Function

Prokaryotic vs. Eukaryotic Cells

  • Prokaryotic cells: No nucleus, no membrane-bound organelles (e.g., bacteria, archaea).

  • Eukaryotic cells: Nucleus and membrane-bound organelles (e.g., plants, animals, fungi, protists).

Cell Organelles and Their Functions

  • Nucleus: Contains genetic material (DNA).

  • Mitochondria: Site of cellular respiration; produces ATP.

  • Chloroplast: Site of photosynthesis (plants and algae).

  • Endoplasmic reticulum (ER): Protein and lipid synthesis; rough ER has ribosomes, smooth ER does not.

  • Golgi apparatus: Modifies, sorts, and packages proteins and lipids.

  • Lysosome: Digests macromolecules and old cell parts.

  • Plasma membrane: Controls movement of substances in and out of the cell.

Membrane Structure and Function

  • Phospholipid bilayer: Hydrophilic heads face outward, hydrophobic tails inward.

  • Selective permeability: Only certain molecules can cross easily.

  • Transport proteins: Facilitate movement of substances across the membrane.

Transport Mechanisms

  • Passive transport: No energy required (e.g., diffusion, osmosis, facilitated diffusion).

  • Active transport: Requires energy (ATP) to move substances against their concentration gradient.

  • Endocytosis/exocytosis: Bulk transport into/out of the cell.

Metabolism and Enzymes

Metabolic Pathways

  • Metabolism: All chemical reactions in a cell.

  • Anabolic pathways: Build complex molecules from simpler ones; require energy.

  • Catabolic pathways: Break down complex molecules; release energy.

Energy and Thermodynamics

  • First law of thermodynamics: Energy cannot be created or destroyed, only transformed.

  • Second law of thermodynamics: Every energy transfer increases the entropy (disorder) of the universe.

  • Free energy (Gibbs free energy):

  • Spontaneous reactions have .

ATP: The Energy Currency

  • ATP (adenosine triphosphate): Stores and transfers energy for cellular work.

  • Energy is released when ATP is hydrolyzed to ADP and inorganic phosphate.

Enzymes

  • Enzymes: Biological catalysts that speed up reactions by lowering activation energy.

  • Active site: Region on the enzyme where the substrate binds.

  • Induced fit: Enzyme changes shape to fit the substrate.

  • Factors affecting enzyme activity: Temperature, pH, substrate concentration, inhibitors.

  • Competitive inhibitors: Bind to the active site, blocking substrate.

  • Noncompetitive inhibitors: Bind elsewhere, changing enzyme shape.

  • Allosteric regulation: Enzyme activity is regulated by molecules binding to sites other than the active site.

  • Feedback inhibition: End product of a pathway inhibits an earlier step.

Table: Factors Affecting Enzyme Activity

Factor

Effect

Temperature

Increases rate up to optimum; denatures enzyme if too high

pH

Each enzyme has an optimal pH; extremes denature enzyme

Substrate concentration

Rate increases until enzyme is saturated

Inhibitors

Decrease enzyme activity

Additional info:

  • These notes cover core concepts from AP/General Biology Units 1–4, including scientific inquiry, chemistry of life, macromolecules, cell structure and function, and metabolism/enzymes.

  • For diagrams (e.g., cell structure, enzyme action), refer to your textbook or class resources.

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