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Microbiology: Genetics and Molecular Biology

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  • What is genetics?

    Genetics is the science of heredity, studying genes, how they carry information, replicate, and express traits in organisms.

  • What is a genome?

    The genome is the complete set of genetic information in a cell, including chromosomes and plasmids.

  • What are genes composed of?

    Genes are segments of DNA (or RNA in some viruses) that code for functional products, usually proteins or RNA molecules.

  • Describe the structure of DNA.

    DNA is a double helix of two strands with sugar-phosphate backbones and complementary nitrogenous bases: adenine pairs with thymine, cytosine pairs with guanine.

  • What is the central dogma of molecular biology?

    The central dogma states that genetic information flows from DNA to RNA to protein.

  • Define genotype and phenotype.

    Genotype is the genetic makeup (DNA) of an organism; phenotype is the expressed traits or characteristics resulting from gene expression.

  • What is the typical structure of bacterial chromosomes?

    Bacteria usually have a single circular chromosome of DNA, supercoiled and attached to the plasma membrane.

  • What is vertical gene transfer?

    Vertical gene transfer is the replication and transfer of DNA from parent to offspring cells during cell division.

  • What is horizontal gene transfer?

    Horizontal gene transfer is the transfer of genetic material between cells of the same generation, not from parent to offspring.

  • What is semiconservative DNA replication?

    Each new DNA molecule contains one original (parental) strand and one newly synthesized strand.

  • What enzymes are involved in DNA replication?

    Key enzymes include helicase (unwinds DNA), DNA polymerase (synthesizes new strands), primase (makes RNA primers), ligase (joins fragments), and topoisomerase (relaxes supercoiling).

  • Why are DNA strands antiparallel?

    DNA strands run in opposite directions (5' to 3' and 3' to 5') to allow complementary base pairing and proper replication.

  • What are Okazaki fragments?

    Short DNA fragments synthesized discontinuously on the lagging strand during DNA replication.

  • How is energy supplied for DNA replication?

    Energy comes from hydrolysis of nucleoside triphosphates, releasing phosphate groups to form new DNA bonds.

  • What role do methylases play in DNA replication?

    Methylases add methyl groups to new DNA strands to help distinguish them from template strands for repair.

  • What is transcription?

    Transcription is the synthesis of messenger RNA (mRNA) from a DNA template.

  • How does RNA differ from DNA in base pairing?

    In RNA, uracil (U) replaces thymine (T) and pairs with adenine (A) during transcription.

  • What is the function of RNA polymerase?

    RNA polymerase synthesizes RNA by copying the DNA template strand during transcription.

  • What is translation?

    Translation is the process of decoding mRNA codons to assemble amino acids into a protein at the ribosome.

  • What is a codon?

    A codon is a sequence of three nucleotides in mRNA that specifies a particular amino acid.

  • What is the genetic code degeneracy?

    Most amino acids are encoded by multiple codons, allowing some mutations without changing the protein.

  • What is the start codon and what amino acid does it code for in bacteria?

    The start codon is AUG, coding for formylmethionine (fMet) in bacteria, initiating protein synthesis.

  • What is the role of tRNA in translation?

    tRNA molecules carry amino acids and have anticodons that base-pair with mRNA codons to add amino acids to the growing protein.

  • What are the three sites on a ribosome during translation?

    The A site (aminoacyl), P site (peptidyl), and E site (exit) coordinate tRNA binding and peptide chain elongation.

  • When does translation stop?

    Translation stops when the ribosome reaches a stop codon (UAA, UAG, or UGA) on the mRNA, releasing the completed polypeptide.

  • Why can translation begin before transcription is complete in prokaryotes?

    Because prokaryotes lack a nucleus, ribosomes can bind mRNA while it is still being transcribed in the cytoplasm.

  • What additional step occurs in eukaryotic mRNA processing but not in prokaryotes?

    Eukaryotic mRNA undergoes splicing to remove introns and join exons before translation.

  • What is the function of the promoter in transcription?

    The promoter is a DNA sequence where RNA polymerase binds to initiate transcription.

  • How do tetracycline antibiotics inhibit bacterial protein synthesis?

    Tetracyclines block the binding of aminoacyl-tRNA to the A site of the ribosome, halting translation elongation.