BackAdaptive Immunity: Mechanisms, Cells, and Molecular Basis
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Adaptive Immunity
Overview of Adaptive Immunity
Adaptive immunity is the body's highly specific defense mechanism against distinct pathogens and their products. Unlike innate immunity, adaptive immunity is characterized by its ability to recognize specific antigens, generate tailored responses, and remember previous encounters for faster future responses.
Specificity: Targets unique antigens.
Inducibility: Activated in response to specific pathogens.
Clonality: Generates clones of lymphocytes specific to the antigen.
Unresponsiveness to self: Normally does not attack the body's own cells.
Memory: Remembers antigens for faster secondary responses.

Cells Involved in Adaptive Immunity
Adaptive immunity primarily involves lymphocytes, which are a type of white blood cell. The two main types are:
B lymphocytes (B cells): Mature in the bone marrow and are responsible for antibody-mediated (humoral) immunity.
T lymphocytes (T cells): Mature in the thymus and are responsible for cell-mediated immunity.

Types of Adaptive Immune Responses
Cell-mediated immune responses: Involve T cells that directly attack infected or abnormal cells.
Antibody (humoral) immune responses: Involve B cells that produce antibodies to neutralize pathogens.

Elements of Adaptive Immunity
The Lymphatic System
The lymphatic system is composed of lymphatic vessels, cells, tissues, and organs. It screens the body's tissues for foreign antigens and returns lymph to the circulatory system.
Lymphatic vessels: One-way system conducting lymph from tissues to the circulatory system.
Lymph: Fluid similar to blood plasma, derived from interstitial fluid.
Primary lymphoid organs: Red bone marrow and thymus (sites of lymphocyte maturation).
Secondary lymphoid organs: Lymph nodes, spleen, tonsils, and mucosa-associated lymphoid tissue (MALT).

Antigens
Antigens are molecules recognized as foreign by the immune system and capable of provoking an immune response. They are identified by specific regions called epitopes.
Best antigens: Large, complex macromolecules such as proteins from microbes.
Sources: Bacterial components, viral proteins, fungi, protozoa, food, and dust.

Types of Antigens
Exogenous antigens: Toxins and components of microbial cell walls, membranes, flagella, and pili.
Endogenous antigens: Produced by microbes that reproduce inside body cells.
Autoantigens: Derived from normal cellular processes.

Major Histocompatibility Complex (MHC) and Antigen-Presenting Cells
The MHC is a group of glycoproteins found on the membranes of most vertebrate cells. They are essential for antigen presentation and determining tissue compatibility.
MHC class I: Present on all nucleated cells except red blood cells.
MHC class II: Present on antigen-presenting cells (APCs) such as macrophages and dendritic cells.

Antigen Processing and Presentation
Antigens must be processed and presented by MHC molecules to be recognized by T cells. The process differs for endogenous and exogenous antigens.
Endogenous antigens: Processed within infected cells and presented on MHC I molecules.
Exogenous antigens: Processed by APCs and presented on MHC II molecules.

T Lymphocytes (T Cells)
Development and Specificity
T cells are produced in the red bone marrow and mature in the thymus. They circulate in the lymph and blood and migrate to secondary lymphoid organs. Each T cell has a unique T cell receptor (TCR) that recognizes specific antigen-MHC complexes.
TCRs: Bind only to epitopes presented by MHC molecules.
Function: Primarily act against cells harboring intracellular pathogens or abnormal proteins.

Types of T Lymphocytes
Cytotoxic T lymphocytes (Tc): Directly kill infected or abnormal cells.
Helper T lymphocytes (Th): Regulate B cells and Tc cells; include Th1 and Th2 subtypes.
Regulatory T lymphocytes (Tr): Suppress immune responses to prevent autoimmunity.

Clonal Deletion of T Cells
To prevent autoimmunity, self-reactive T cells are eliminated in the thymus through clonal deletion. T cells that react to self-antigens undergo apoptosis, while those that recognize foreign antigens survive.
T cells not recognizing MHC undergo apoptosis.
T cells recognizing autoantigens die by apoptosis or become regulatory T cells.
Surviving T cells form the repertoire of protective T cells.

B Lymphocytes (B Cells) and Antibodies
Development and Function
B cells mature in the bone marrow and are primarily found in the spleen, lymph nodes, and MALT. Their main function is the production and secretion of antibodies.
B Cell Receptor (BCR) Specificity
Each B cell expresses a unique BCR capable of recognizing a specific epitope. The diversity of BCRs allows the immune system to recognize millions of different antigens.
Two variable regions form the antigen-binding sites.
Each B cell produces only one type of BCR.

Generation of Antibody Diversity
The diversity of BCRs is generated by the recombination of gene segments (V, D, J) through the action of the RAG enzyme.

Antibody Structure and Function
Antibodies (immunoglobulins) are secreted by plasma cells and have antigen-binding sites identical to the BCR of the activated B cell. They function in:
Activation of complement and inflammation
Neutralization of toxins and pathogens
Opsonization (enhancing phagocytosis)
Agglutination (clumping of antigens)
Antibody-dependent cellular cytotoxicity (ADCC)

Classes of Antibodies
There are five main classes of antibodies, each with distinct roles:
IgM: First antibody produced during an immune response.
IgG: Most common and long-lasting; provides the majority of antibody-based immunity.
IgA: Found in body secretions (e.g., saliva, tears, breast milk).
IgE: Involved in allergic responses and defense against parasitic infections.
IgD: Function not fully understood.

Clonal Deletion of B Cells
Self-reactive B cells are eliminated or inactivated in the bone marrow to prevent autoimmunity. Some may change their BCR rather than undergo apoptosis.

Immune Response Cytokines
Cytokines are soluble regulatory proteins that act as intercellular signals in the immune system. They include:
Interleukins (ILs): Signal among leukocytes.
Interferons (IFNs): Antiviral proteins that may act as cytokines.
Growth factors: Stimulate stem cell division.
Tumor necrosis factor (TNF): Kills tumor cells and regulates immune responses.
Chemokines: Signal leukocytes to move (chemotaxis).

Cell-Mediated Immune Responses
Activation of Cytotoxic T Cells
Cell-mediated immunity targets intracellular pathogens and abnormal body cells. The activation of cytotoxic T cells involves:
Antigen presentation
Helper T cell differentiation
Clonal expansion
Self-stimulation

Mechanisms of Cytotoxic T Cell Killing
Perforin-granzyme pathway: Cytotoxic T cells release perforin and granzymes to induce apoptosis in target cells.
CD95 pathway: Involves interaction with CD95 on target cells, leading to apoptosis.

Memory T Cells
Some activated T cells become memory T cells, which persist in lymphoid tissues and respond rapidly upon re-exposure to the same antigen.
T Cell Regulation
Regulation is essential to prevent T cell responses against self-antigens. Regulatory T cells and additional signals from antigen-presenting cells help maintain self-tolerance.
Antibody Immune Responses (Humoral Immunity)
T-Dependent Antibody Immunity and Clonal Selection
Most antibody responses require the assistance of helper T cells (T-dependent). The process involves:
Antigen presentation for Th activation and proliferation
Differentiation of helper T cells into Th2 cells
Activation of B cells
Proliferation and differentiation of B cells into plasma cells and memory cells

Plasma Cells and Memory B Cells
Plasma cells: Short-lived cells that secrete large amounts of antibodies specific to the antigen.
Memory B cells: Long-lived cells that do not secrete antibodies but can rapidly respond to future exposures to the same antigen.
Primary and Secondary Immune Responses
Primary response: Initial exposure to antigen; slower and produces less antibody.
Secondary response: Subsequent exposures; faster and produces more antibody due to memory cells.

Types of Acquired Immunity
Acquired immunity can be classified based on how it is obtained:
Naturally acquired: Through natural exposure to antigens (e.g., infection).
Artificially acquired: Through medical intervention (e.g., vaccination).
Active immunity: The body produces its own antibodies.
Passive immunity: Antibodies are transferred from another source (e.g., maternal antibodies).
