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BIO 205-40 Microbiology: Course Overview and Study Guide

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Members of the Bacterial World

  • Members of the Bacterial World
    06:17

Introduction to Bacteria

  • Introduction to Bacteria
    06:18

Introduction to Eukarya

  • Helminths
    01:27
  • Fungi
    02:49
  • Introduction to Eukarya
    03:28

Introduction to Microscopes

  • Introduction to Microscopes
    06:13

Introduction to Staining

  • Introduction to Staining
    02:10

Simple Staining

  • Simple Staining
    03:23
  • Simple Staining Basic & Acidic Dyes
    05:30

Differential Staining

  • Differential Staining
    04:07

Gram Stain

  • Gram Stain
    04:57

Cell Envelope & Biological Membranes

  • Cell Envelope & Biological Membranes Example 1
    02:21
  • Biological Membranes
    02:10
  • Intro to Biological Membranes
    06:16

Bacterial & Eukaryotic Cell Membranes

  • Cholesterol in Animal Membranes
    02:38
  • Bacterial & Eukaryotic Cell Membranes
    03:58

Prokaryotic & Eukaryotic Cells

  • Recap:Prokaryotic vs. Eukaryotic Cells
    04:26
  • Prokaryotic & Eukaryotic Cells
    05:54
  • Features of Bacterial Cells
    03:54

Binary Fission

  • Binary Fission
    02:16
  • Steps of Binary Fission
    04:57

Bacterial Cell Morphology & Arrangements

  • Types of Bacterial Cell Morphology
    02:44
  • Bacterial Cell Morphology & Arrangements
    01:13
  • Bacilli Bacterial Cell Arrangements
    03:56

Overview of Prokaryotic Cell Structure

  • Overview of Prokaryotic Cell Structure
    05:59

Introduction to Bacterial Cell Walls

  • Peptidoglycan
    01:58
  • Types of Bacterial Cell Walls
    02:44
  • Peptidoglycan Structure
    04:44

Gram-Positive Cell Walls

  • Teichoic Acids
    03:58
  • Gram-Positive Cell Walls
    02:59

Gram-Negative Cell Walls

  • Gram-Negative Cell Walls
    3:04
  • Porins
    02:18
  • The Outer Membrane
    02:15

Gram-Positive vs. Gram-Negative Cell Walls

  • Mnemonic for Gram-Positive vs. Gram-Negative Cell Walls
    01:41
  • Gram-Positive vs. Gram-Negative Cell Walls
    04:46

The Glycocalyx: Capsules & Slime Layers

  • The Glycocalyx: Capsules & Slime Layers
    02:26
  • Capsules vs. Slime Layers
    01:53

Introduction to Biofilms

  • Introduction to Biofilms
    03:31

Pili

  • Sex Pilus
    03:29
  • Cell Motility by Pili
    02:59
  • Pili
    01:02

Fimbriae & Hami

  • Fimbriae & Hami
    01:52
  • Hami
    01:51

Introduction to Prokaryotic Flagella

  • Types of Flagellar Distribution on Bacteria
    05:22
  • Introduction to Prokaryotic Flagella
    02:07

Prokaryotic Flagellar Structure

  • Structure of Gram-Positive Basal Body
    02:28
  • Prokaryotic Flagellar Structure
    02:53
  • Gram-Negative vs. Gram-Positive Basal Body Structure
    01:59

Prokaryotic Flagellar Movement

  • Prokaryotic Flagellar Movement
    02:43
  • Runs and Tumbles
    03:17

Proton Motive Force Drives Flagellar Motility

  • Proton Motive Force Drives Flagellar Motility
    04:17

Chemotaxis

  • Cell Motility During Chemotaxis
    05:11
  • Chemotaxis
    03:21

Review of Prokaryotic Surface Structures

  • Review of Prokaryotic Surface Structures
    03:52
  • Types of Cell Motility
    02:13

Prokaryotic Ribosomes

  • Prokaryotic Ribosomes
    01:51
  • Structure of Prokaryotic Ribosomes
    08:39

Introduction to Bacterial Plasmids

  • Episomes
    01:47
  • Introduction to Bacterial Plasmids
    02:52

Cell Inclusions

  • Cell Inclusions
    05:20

Endospores

  • Endospores
    05:35
  • Endospore Structure
    03:08

Sporulation

  • Sporulation
    04:08

Germination

  • Germination
    02:59

Introduction to Microbial Genetics

  • Map of the Lesson on Microbial Genetics
    02:04
  • Introduction to Microbial Genetics
    04:20

Introduction to Mutations

  • Spontaneous vs. Induced Mutations
    02:47
  • Introduction to Mutations
    00:37
  • Types of Mutations
    08:44

Horizontal Gene Transfer

  • Fates of Horizontally Transferred DNA
    03:13
  • Horizontal Gene Transfer
    04:42
  • Integration of DNA via Homologous Recombination
    02:52

Bacterial Transformation

  • Bacterial Transformation
    03:06
  • Mechanism of Natural Transformation
    03:49

Transduction

  • Generalized Transduction
    04:24
  • Transduction
    06:49
  • Specialized Transduction
    06:34

Introduction to Conjugation

  • Introduction to Conjugation
    04:21

Conjugation: F Plasmids

  • F Plasmids
    05:57
  • Mechanism of F Plasmid Conjugation in E. coli
    04:12

Conjugation: Hfr & F' Cells

  • F’ Cell Conjugation
    04:31
  • Hfr Cell Conjugation
    09:41

Genome Variability

  • Phage DNA
    01:44
  • Genome Variability
    01:59
  • Genome Variability
    03:18

CRISPR CAS

  • CRISPR CAS
    07:43

Introduction to Viruses

  • General Structure of Viruses
    04:47
  • Three Common Shapes of Viruses
    03:19
  • Enveloped vs. Non-Enveloped Viruses
    05:09

Acellular Infectious Agents: Viruses, Viroids & Prions

  • Viruses
    03:22
  • Prions
    02:48
  • Acellular Infectious Agents: Viruses, Viroids & Prions
    02:54

Viroids

  • Viroids
    03:49

Prions

  • Prion Development in Neurons Leads to Scrapie
    04:00
  • Prions
    03:05

Bacterial Pathogenesis

  • Intro to Bacterial Pathogenesis
    02:35
  • 1) Exposure to Pathogen
    03:27
  • 3) Invasion into Host Tissues
    05:38

Introduction to Pathogenic Toxins

  • Introduction to Pathogenic Toxins
    03:40

Exotoxins Cause Damage to the Host

  • 1) A-B Toxins
    04:44
  • Types of Exotoxins
    03:30
  • 3) Superantigens
    03:59

Endotoxin Causes Damage to the Host

  • Endotoxin
    02:46
  • Lipid A Causes Septic Shock
    03:24

Exotoxins vs. Endotoxin Review

  • Exotoxins vs. Endotoxin Review
    07:22

Immune Response Damage to the Host

  • Inflammatory Response Can damage the Host
    03:31
  • Intro to Immune Response Damage
    02:57
  • Adaptive Immunity Can Damage the Host
    03:22

Introduction to Avoiding Host Defense Mechanisms

  • Introduction to Avoiding Host Defense Mechanisms
    01:59

Introduction to Immunity

  • Innate vs. Adaptive Immunity
    05:52
  • Antigens & Antibodies
    02:58

Introduction to Innate Immunity

  • Introduction to Innate Immunity
    02:30
  • Map of Lesson on Innate Immunity
    06:42

Introduction to First-Line Defenses

  • Introduction to First-Line Defenses
    01:51
  • Map of the Lesson on First-Line Defenses
    01:35

Physical Barriers in First-Line Defenses: Skin

  • Physical Barriers in First-Line Defenses: Skin
    01:28
  • Physical Barriers in First-Line Defenses: Skin
    03:58

Physical Barriers in First-Line Defenses: Mucous Membrane

  • Peristalsis & Mucociliary Escalator
    04:14
  • Mucous Membranes
    02:34

First-Line Defenses: Chemical Barriers

  • Chemical Defenses: Gastric Juice Prevents Microbial Growth by Lowering pH
    02:07
  • Chemical Defenses: Earwax Prevents Microbial Growth by Controlling pH
    02:18
  • Chemical Defenses: Sweat Glands Prevent Microbial Growth by Perspiration
    02:04

First-Line Defenses: Normal Microbiota

  • Normal Microbiota
    03:43

Introduction to Cells of the Immune System

  • Introduction to Cells of the Immune System
    03:21
  • Map of the Lesson on Cells of the Immune System
    06:08
  • Hematopoiesis
    02:33

Cells of the Immune System: Granulocytes

  • Granulocytes
    03:32
  • Neutrophils
    05:26
  • Basophils
    03:23

Cells of the Immune System: Agranulocytes

  • Monocytes
    07:16
  • Introduction to Lymphocytes
    03:51
  • Agranulocytes
    03:43

Introduction to Cell Communication

  • Introduction to Cell Communication
    02:59

Cell Communication: Surface Receptors & Adhesion Molecules

  • Cell Surface Receptors
    04:05
  • Adhesion Molecules
    02:58

Cell Communication: Cytokines

  • Cytokines
    02:58
  • Types of Cytokines
    06:08
  • Types of Interleukins
    02:14

Pattern Recognition Receptors (PRRs)

  • Pattern Recognition Receptors
    04:24
  • C-Type Lectin Receptors
    02:44
  • Retinoic acid Inducible Gene (RIG)-Like Receptors
    03:59

Introduction to the Complement System

  • Map of the Lesson on the Complement System
    03:25
  • Introduction to the Complement System
    04:25
  • Proteins of the Complement System
    04:16

Activation Pathways of the Complement System

  • 2) Lectin Pathway
    03:04
  • 1) Alternative Pathway
    04:40
  • 3) Classical Pathway
    03:42

Effects of the Complement System

  • 1) Opsonization
    04:09
  • 2) Cell Lysis of Invading Microbes
    03:18
  • Effects of the Complement System
    01:32

Review of the Complement System

  • Review of the Complement System
    05:15

Phagoctytosis

  • Steps of Phagocytosis
    08:57
  • Phagoctytosis
    02:19

Introduction to Inflammation

  • Types of Inflammatory Responses
    02:52
  • Introduction to Inflammation
    01:38
  • Chronic Inflammation
    03:09

Steps of the Inflammatory Response

  • 2) Release of Inflammatory Mediators & Other Cytokines
    02:15
  • Damaging Effects of the Inflammatory Response
    02:10
  • 3) Vasodilation
    02:39

Fever

  • Fever
    03:57

Interferon Response

  • Interferon Response
    01:32
  • Steps of the Interferon Response
    09:59

Introduction to Adaptive Immunity

  • Overview of Adaptive Immunity
    04:57
  • Primary vs. Secondary Lymphoid Organs
    04:58
  • Introduction to Adaptive Immunity
    05:47

Antigens

  • Free Antigens vs. Presented Antigens on APCs
    04:11
  • Antigens
    03:59

Introduction to T Lymphocytes

  • Cytotoxic T Cells vs. Helper T Cells
    05:58
  • T-Cell Receptors
    05:18
  • Naive T Cells Become Effector & Memory T Cells
    07:56

Major Histocompatibility Complex Molecules

  • Classes of MHC Molecules
    07:17
  • Major Histocompatibility Complex Molecules
    02:31

Activation of T Lymphocytes

  • Activation of T Lymphocytes
    07:33
  • Comic Strip for T Cell Activation
    03:29

Functions of T Lymphocytes

  • Functions of Helper T Cells (TH):Activation of Macrophages
    05:18
  • Types of Helper T Cells (TH)
    03:19
  • Functions of Cytotoxic T Cells (Tc)
    06:21

Review of Cytotoxic vs Helper T Cells

  • Review of Cytotoxic vs Helper T Cells
    04:27
  • Comic Strip for T Cell Functions
    02:58

Introduction to B Lymphocytes

  • B cell Receptors
    04:37
  • Naive B cells Become Effector (Plasma) Cells & Memory Cells
    04:23
  • Introduction to B Lymphocytes
    03:55

Antibodies

  • Antibody Structure
    05:40
  • Antibody Diversity
    02:34
  • Antibodies
    00:48

Classes of Antibodies

  • IgE
    02:45
  • IgA
    02:44
  • Classes of Antibodies
    04:43

Outcomes of Antibody Binding to Antigen

  • Outcomes of Antibody Binding to Antigen
    09:16

T Dependent & T Independent Antigens

  • B Cell Activation by T Dependent Antigens
    05:09
  • T Dependent & T Independent Antigens
    02:08
  • B Cell Activation by T Independent Antigens
    03:11

Clonal Selection

  • Clonal Selection
    06:43

Antibody Class Switching

  • Antibody Class Switching
    07:52

Affinity Maturation

  • Affinity Maturation
    07:27

Primary and Secondary Response of Adaptive Immunity

  • Primary and Secondary Response of Adaptive Immunity
    06:59

Immune Tolerance

  • Central vs. Peripheral Tolerance
    11:54
  • Immune Tolerance
    03:19
  • Football Analogy for Immune Tolerance
    03:21

Regulatory T Cells

  • Regulatory T Cells
    03:53

Natural Killer Cells

  • Natural Killer Cells
    06:53

Review of Adaptive Immunity

  • Review of Adaptive Immunity
    09:20