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Chapter 12: Antimicrobial Treatment – Principles, Drug Groups, and Resistance

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Antimicrobial Treatment: Principles and Practice

Principles of Antimicrobial Therapy

The main goal of antimicrobial treatment is to destroy the infective agent without harming the host’s cells. The ideal antimicrobial drug would be toxic to the microbe but nontoxic to the host, microbicidal rather than microbiostatic, soluble in body fluids, and remain potent long enough to act. However, no drug is perfect, and resistance or adverse effects may occur.

  • Selective toxicity: Drugs should target microbial cells without damaging host tissues.

  • Therapeutic index (TI): The ratio of the dose toxic to humans to the effective dose. A higher TI indicates a safer drug.

  • Antimicrobial susceptibility testing: Methods include the Kirby–Bauer disc diffusion test, Etest, and tube dilution tests to determine the minimum inhibitory concentration (MIC).

Kirby–Bauer disc diffusion test Etest for antimicrobial susceptibility Tube dilution test for MIC

Key terminology:

  • Prophylaxis: Use of a drug to prevent infection.

  • Antimicrobials: Any drug targeting microorganisms.

  • Antibiotics: Drugs produced by microorganisms or synthesized to inhibit bacteria.

  • Synthetic/Semisynthetic drugs: Chemically modified or fully synthesized drugs.

  • Narrow-spectrum: Effective against a limited array of microbes.

  • Broad-spectrum: Effective against a wide variety of microbes.

Origins of Antimicrobial Drugs

Many antibiotics are metabolic products of bacteria and fungi, such as Streptomyces. These organisms produce antibiotics to reduce competition in their environment.

Streptomyces as a source of antibiotics

Mechanisms of Drug Action

Antimicrobial drugs target five major sites in microbes:

  • Cell wall synthesis

  • Nucleic acid structure and function

  • Protein synthesis (ribosomes)

  • Cell membrane structure/function

  • Folic acid synthesis

Primary sites of action of antimicrobial drugs

Adverse Effects of Antimicrobials

Adverse reactions include toxicity to organs, allergic responses, and disruption of normal microbiota, leading to superinfections such as Candida albicans or Clostridioides difficile overgrowth.

Effect of antibiotics on the microbiome

Survey of Major Antimicrobial Drug Groups

Spectrum of Activity

Broad-spectrum drugs (e.g., tetracyclines) act against multiple groups of bacteria, while narrow-spectrum drugs (e.g., penicillin) target specific groups.

Spectrum of activity for antibiotics

Cell Wall Inhibitors

β-Lactam antibiotics (penicillins, cephalosporins, carbapenems) inhibit cell wall synthesis. Penicillins consist of a thiazolidine ring, β-lactam ring, and variable side chain. Resistance can occur via β-lactamase enzymes.

Structure of penicillins Cell wall inhibitors

Protein Synthesis Inhibitors

Aminoglycosides, tetracyclines, macrolides, streptogramins, oxazolidinones, and pleuromutilins inhibit protein synthesis by targeting bacterial ribosomes.

Structure of streptomycin Sites of inhibition on bacterial ribosome Structure of macrolide antibiotics

Folic Acid Synthesis Inhibitors

Sulfonamides (sulfa drugs) block enzymes required for folic acid synthesis, affecting DNA, RNA, and amino acid production.

Silver sulfadiazine cream Sulfa drug mechanism

DNA/RNA Synthesis Inhibitors

Fluoroquinolones inhibit DNA unwinding enzymes (helicases), stopping transcription. Rifampin is used for gram-positive rods and tuberculosis.

Fluoroquinolone mechanism

Cell Membrane Disruptors

Polymyxins and daptomycin interact with membrane phospholipids, causing leakage and cell death, especially in gram-negative bacteria.

Biofilm Treatment

Biofilm bacteria are less sensitive to antimicrobials. Treatment strategies include interrupting quorum-sensing pathways and using drugs like daptomycin.

Antifungal, Antiprotozoal, and Antihelminthic Agents

Antifungal drugs include macrolide polyenes, azoles, echinocandins, and allylamines. Antiprotozoal drugs (e.g., metronidazole) and antihelminthics (e.g., albendazole, pyrantel) target specific parasites.

Antiviral Agents

Antiviral drugs act by barring viral entry, blocking replication/transcription/translation, or preventing viral assembly/release.

Inhibition of virus entry Inhibition of nucleic acid synthesis Inhibition of reverse transcription Inhibition of viral assembly/release

Antimicrobial Resistance

Acquisition of Resistance

Microbes acquire resistance through spontaneous mutation or horizontal gene transfer (conjugation, transformation, transduction). Resistance mechanisms include:

  • Synthesis of new enzymes (e.g., penicillinase)

  • Decreased permeability or uptake of the drug

  • Immediate elimination of the drug (active efflux)

  • Decreased number or affinity of drug binding sites

  • Alternative metabolic pathways

Mechanisms of drug resistance Binding site and metabolic pathway resistance

Natural Selection and Human Role

Drug-resistant microbes survive and proliferate when exposed to antibiotics. Overuse and misuse in medicine, hospitals, and animal feeds accelerate resistance.

Antibiotic resistance How antibiotic resistance happens

New Approaches and Probiotics

Novel strategies include nanomaterials, antisense RNAs, CRISPR, bacteriophages, and targeting gram-negative membrane proteins. Probiotics, prebiotics, and fecal transplants help restore healthy microbiota.

Probiotics Fecal transplant procedure

Summary Table: Major Drug Groups and Their Targets

Drug Group

Target

Example

Cell Wall Inhibitors

Peptidoglycan synthesis

Penicillin, Cephalosporin

Protein Synthesis Inhibitors

Ribosomes

Streptomycin, Tetracycline, Erythromycin

Folic Acid Synthesis Inhibitors

Enzymes for folic acid

Sulfonamides

DNA/RNA Synthesis Inhibitors

DNA/RNA polymerases

Fluoroquinolones, Rifampin

Cell Membrane Disruptors

Membrane phospholipids

Polymyxin

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