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Enterobacteriaceae and Pseudomonas: Identification and Differentiation in Clinical Microbiology

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Enterobacteriaceae and Pseudomonas

Background and General Characteristics

The Enterobacteriaceae (enterics) and Pseudomonas are important groups of Gram-negative rods relevant to clinical microbiology. Enterics are normal inhabitants of the intestines in humans and animals, while Pseudomonas species are primarily free-living in soil and water. Both groups include significant human pathogens.

  • Enterobacteriaceae: Gram-negative rods, facultative anaerobes, ferment glucose, may or may not ferment lactose.

  • Pseudomonas: Gram-negative rods, oxidase positive, primarily non-fermenters, notable for environmental resilience and opportunistic infections.

Gram-negative rods under microscope

Normal Flora vs. Pathogenic Enterics

Some enterics are part of the normal intestinal flora, while others are pathogenic. The ability to ferment lactose is a key differentiator:

  • Lactose fermenters (Normal Flora): Escherichia coli

  • Lactose non-fermenters (Pathogens): Salmonella spp., Shigella spp., Vibrio cholerae

Pathogenic Enterics

  • Salmonella: Causes enteric fever (typhoid), gastroenteritis, and septicemia. Transmission via contaminated water, food (especially eggs), or reptiles (e.g., turtles).

  • Shigella: Infects humans and primates, causing symptoms from mild diarrhea to severe bacillary dysentery.

  • Vibrio: Vibrio cholerae causes cholera, characterized by severe watery diarrhea ("rice water" stools). Vibrio parahaemolyticus is associated with seafood-borne gastroenteritis.

Isolation and Differentiation of Enteric Bacteria

Selective and Differential Media

Isolation and identification of enteric bacteria rely on selective and differential media that exploit differences in lactose fermentation and Gram reaction.

EMB (Eosin Methylene Blue) Agar

  • Selective: Inhibits Gram-positive bacteria via eosin and methylene blue dyes.

  • Differential: Distinguishes lactose fermenters (colored colonies) from non-fermenters (colorless colonies).

  • Results: E. coli produces a green metallic sheen; Enterobacter aerogenes forms pink colonies with dark centers.

EMB agar showing lactose fermenters and non-fermenters

MacConkey Agar

  • Selective: Bile salts and crystal violet inhibit Gram-positive bacteria.

  • Differential: Lactose fermenters form red/purple colonies; non-fermenters are colorless.

  • Indicator: Neutral red dye stains lactose fermenters.

MacConkey agar with lactose fermenter and non-fermenter MacConkey agar close-up of lactose fermenter MacConkey agar with labeled lactose positive and negative

Colony Morphology on Selective Media

  • Lactose fermenters: Pink/red colonies on MacConkey; green sheen or dark centers on EMB.

  • Lactose non-fermenters: Colorless or pale colonies on both media.

EMB agar with non-fermenter colonies EMB agar with metallic green sheen

Biochemical Identification of Enteric Bacteria

Triple Sugar Iron (TSI) Agar Test

The TSI test differentiates enteric bacteria based on their ability to ferment glucose, lactose, and sucrose, produce gas, and generate hydrogen sulfide (H2S).

  • Indicator: Phenol red (acid production), iron compounds (H2S detection).

  • Interpretation:

    • Yellow butt/red slant: Glucose fermentation only

    • Yellow butt and slant: Lactose and/or sucrose fermentation

    • Red butt and slant: No sugar fermentation

    • Blackening: H2S production

    • Cracks/lifting: Gas production

TSI slant showing glucose fermentation TSI slant showing H2S production TSI slant showing no sugar fermentation TSI slant showing sucrose/lactose fermentation with gas

IMViC Tests

The IMViC series (Indole, Methyl Red, Voges-Proskauer, Citrate) is used to further differentiate enteric bacteria, especially E. coli and Enterobacter species.

  • Indole Test: Detects indole production from tryptophan using Kovac’s reagent (red color = positive).

  • Methyl Red Test: Detects mixed acid fermentation (red at pH 4 = positive).

  • Voges-Proskauer Test: Detects butanediol fermentation (red color after reagents = positive).

  • Citrate Utilization: Detects ability to use citrate as sole carbon source (blue color = positive).

Methyl red test results: positive and negative

Pseudomonas

Background and Identification

Pseudomonas aeruginosa is a Gram-negative, oxidase-positive rod, notable for its environmental resilience and role as an opportunistic pathogen. It does not ferment glucose and is distinguished from enterics by its oxidase positivity and pigment production.

  • Growth Media: Pseudosel agar (PSA) and Mueller Hinton agar are used for isolation.

  • Pigment Production: PSA stimulates production of pyocyanin (blue-green pigment) and fluorescein (fluorescent under UV).

  • Colony Odor: Fruity, grape-like smell.

Key Biochemical Tests for Pseudomonas

  • Oxidase Test: Positive (turns black within 20–30 minutes).

  • Glucose Fermentation: Negative (no acid production in glucose media).

Summary Table: Key Biochemical Tests for Enterics and Pseudomonas

Test

Enterobacteriaceae

Pseudomonas aeruginosa

Gram Reaction

Negative rods

Negative rods

Oxidase

Negative

Positive

Glucose Fermentation

Positive

Negative

Lactose Fermentation

Variable (used for differentiation)

Negative

Pigment Production

None

Pyocyanin, fluorescein

Additional info: The Enterotube system is a rapid identification method for enterics, allowing multiple biochemical tests from a single colony. The IMViC series is especially useful for distinguishing E. coli (Indole+, Methyl Red+, VP-, Citrate-) from Enterobacter (Indole-, Methyl Red-, VP+, Citrate+).

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