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Microbial Diseases of the Nervous System: Structure, Pathogenesis, and Key Pathogens

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Microbial Diseases of the Nervous System

Structure and Function of the Nervous System

The nervous system is divided into the central nervous system (CNS) and the peripheral nervous system (PNS). The CNS consists of the brain and spinal cord, while the PNS includes all nerves branching from the CNS. The brain and spinal cord are protected by three layers of membranes called meninges: dura mater (outer), arachnoid mater (middle), and pia mater (inner). The subarachnoid space contains cerebrospinal fluid (CSF), which cushions the CNS. The blood-brain barrier restricts the passage of substances from the blood into the CNS, providing protection against pathogens but also complicating treatment of infections.

Diagram of the human nervous system showing CNS and PNS Diagram of the meninges and cerebrospinal fluid

Inflammatory Diseases of the CNS

  • Meningitis: Inflammation of the meninges.

  • Encephalitis: Inflammation of the brain.

  • Meningoencephalitis: Inflammation of both the brain and meninges.

Bacterial Meningitis

General Features

Bacterial meningitis is a severe infection characterized by fever, headache, and a stiff neck, often followed by nausea, vomiting, convulsions, and coma. Death can result from shock and inflammation caused by bacterial endotoxins and cell wall fragments. Viral meningitis is more common but generally milder.

Key Bacterial Pathogens

  • Haemophilus influenzae type b (Hib): Gram-negative, aerobic, normal throat microbiota. Mainly affects children (6 months to 4 years). Prevented by the Hib vaccine.

  • Neisseria meningitidis (Meningococcal Meningitis): Aerobic, gram-negative diplococcus with a capsule. Six serotypes are associated with disease. Transmitted via droplets and secretions; 40% of people are healthy carriers. Symptoms are largely due to endotoxin. Mortality is 9–12% with antibiotics, 80% without. Outbreaks are common in crowded settings. Vaccines protect against most serogroups.

SEM of Neisseria meningitidis interacting with cilia

  • Streptococcus pneumoniae (Pneumococcal Meningitis): Gram-positive, encapsulated diplococcus. 70% of people are healthy carriers. Also causes pneumonia and otitis media. Most common in children (1 month to 4 years). Mortality is higher in the elderly. Prevented by conjugate vaccine.

Diagnosis and Treatment

  • Diagnosis involves sampling CSF via spinal tap (lumbar puncture), Gram stain, culture, and latex agglutination tests.

  • Immediate chemotherapy with broad-spectrum third-generation cephalosporins is recommended before diagnosis is confirmed.

Spinal tap (lumbar puncture) procedure

Listeriosis

Pathogen and Transmission

Listeria monocytogenes is a gram-positive rod that causes listeriosis. It can affect adults (usually mild or asymptomatic, but severe in immunocompromised individuals) and fetuses/newborns (can cause stillbirth or fatal meningitis). Transmission is typically foodborne (deli meats, unpasteurized dairy, produce). The bacterium can grow at refrigerator temperatures and spreads from cell to cell within phagocytes.

TEM of Listeria monocytogenes spreading between macrophages

  • Treatment: Penicillin is effective.

Tetanus

Pathogen and Pathogenesis

Clostridium tetani is a gram-positive, endospore-forming, obligate anaerobe found in soil. It grows in deep wounds under anaerobic conditions and releases tetanospasmin, a neurotoxin that blocks muscle relaxation, causing spasms. Death results from respiratory muscle spasms.

  • Prevention: Vaccination with tetanus toxoid (DTaP), with boosters every 10 years.

  • Treatment: Tetanus immune globulin (TIG) and debridement of infected tissue.

Botulism

Pathogen and Pathogenesis

Clostridium botulinum is a gram-positive, endospore-forming, obligate anaerobe found in soil and aquatic sediments. Disease results from ingestion of botulinal exotoxin, which blocks acetylcholine release, causing flaccid paralysis. Death is usually due to respiratory or cardiac failure.

Graph of botulism cases in the United States by year and type

  • Types: Type A (most fatal, heat-resistant), Type B, Type E (marine/lake sediments, less heat-resistant).

  • Diagnosis: Inoculation of immunized mice with patient samples.

  • Treatment: Respiratory support and antitoxins; prevention by proper canning and nitrites in foods.

Leprosy (Hansen’s Disease)

Pathogen and Clinical Forms

Caused by Mycobacterium leprae and M. lepromatosis, acid-fast rods that grow best at 30°C and have a long generation time. The bacteria infect peripheral nerves and skin cells, surviving in macrophages and invading the myelin sheath. Transmission requires prolonged contact or inhalation of secretions. Two forms exist:

  • Tuberculoid (neural) form: Loss of sensation in skin areas.

  • Lepromatous (progressive) form: Disfiguring nodules, mucous membrane involvement.

Photos of tuberculoid and lepromatous leprosy lesions

  • Diagnosis: Skin biopsy, acid-fast stain, blood test.

  • Treatment: Dapsone, rifampin, clofazimine for 6–24 months.

Poliomyelitis

Pathogen and Pathogenesis

Caused by the poliovirus, transmitted by ingestion of contaminated water. Most cases are mild or asymptomatic; less than 1% develop paralysis due to destruction of motor neurons. Death can result from respiratory failure.

  • Three serotypes: Types 1, 2, and 3.

  • Vaccines: Salk (inactivated, injectable, IPV) and Sabin (attenuated, oral, OPV). IPV is currently used in the U.S.

Rabies

Pathogen and Transmission

Rabies is caused by the rabies virus (genus Lyssavirus), a bullet-shaped, single-stranded RNA virus. It is usually transmitted by the bite of an infected animal, but can also enter through mucous membranes or abraded skin. In the U.S., silver-haired bats are a common source.

Photo of a silver-haired bat, a rabies reservoir

Pathogenesis and Clinical Forms

The virus multiplies in skeletal muscle, travels via the PNS to the CNS, and causes encephalitis. Incubation averages 30–50 days. Negri bodies (viral inclusions) are seen in the brainstem. Two clinical forms:

  • Furious (classical) rabies: Restlessness, excitability, aggressive biting, hydrophobia, paralysis, death.

  • Paralytic (dumb) rabies: Minimal excitability, unawareness, often seen in cats.

Diagram of rabies virus pathogenesis in humans Negri body in neuron (histological image)

Diagnosis, Treatment, and Epidemiology

  • Diagnosis: Direct fluorescent-antibody (DFA) test or rapid histochemical test (RIT) on bodily fluids.

  • Postexposure prophylaxis (PEP): Vaccine plus immune globulin (HDCV and RIG).

  • Milwaukee protocol: Induced coma and antivirals (rarely successful).

  • Reservoirs: Bats, skunks, foxes, raccoons, unvaccinated domestic animals.

Map of rabies cases in U.S. wildlife species Bar graph of rabies cases by animal type in the U.S.

Vertical Transmission of Microbial Diseases

Overview

Some pathogens can cross the placenta and cause congenital infections, leading to serious fetal damage. The TORCH screen tests for common vertically transmitted infections in pregnant women or newborns:

  • Toxoplasmosis

  • Other: Syphilis, chickenpox, HIV, measles, mumps, hepatitis B

  • Rubella

  • Cytomegalovirus

  • Herpes simplex virus

Bacteria and protozoa such as Treponema pallidum, Listeria monocytogenes, Group B Streptococcus, Elizabethkingia, and Toxoplasma gondii can also be transmitted vertically.

Arboviral Encephalitis

Overview and Key Viruses

Arboviruses are arthropod-borne viruses, primarily transmitted by mosquitoes. They cause a range of encephalitides with seasonal incidence. Major types include:

  • Eastern Equine Encephalitis (EEE): 30% mortality, causes brain damage and neurological sequelae.

  • Western Equine Encephalitis (WEE): Similar but less common.

  • St. Louis Encephalitis (SLE): Mostly subclinical, affects adults over 40.

  • California Encephalitis (La Crosse): Mild, rarely fatal, affects children.

  • West Nile Virus (WNV): Maintained in bird-mosquito cycle, can cause poliolike paralysis and fatal encephalitis.

  • Heartland and Powassan viruses: Cause neurological problems, thrombocytopenia, and leukopenia.

  • Japanese Encephalitis: High mortality in symptomatic cases, found in Asia.

Diagnosis is by ELISA for IgM antibodies; prevention focuses on mosquito control.

Map of human West Nile virus cases in the U.S., 2021

Fungal and Protozoan Diseases of the Nervous System

Cryptococcal Meningitis

Caused by Cryptococcus neoformans (and related species), a soil fungus associated with bird droppings. Transmitted by inhalation of dried droppings, it can spread to the CNS in immunocompromised individuals. Mortality can reach 30%. Treated with amphotericin B and flucytosine.

LM of Cryptococcus neoformans showing capsule

African Trypanosomiasis (Sleeping Sickness)

Caused by flagellated protozoa Trypanosoma brucei gambiense (West/Central Africa, human reservoir) and T. b. rhodesiense (East/Southern Africa, animal reservoir). Transmitted by tsetse flies, the disease progresses from mild symptoms to CNS deterioration, coma, and death. The parasite evades immunity via antigenic variation, complicating vaccine development. Treated with eflornithine; prevention is by vector control.

Graph showing antigenic variation in trypanosomes

Amebic Meningoencephalitis

  • Naegleria fowleri: Causes primary amebic meningoencephalitis (PAM), infects via nasal mucosa from swimming water, rapidly fatal.

  • Acanthamoeba spp.: Causes granulomatous amebic encephalitis (GAE), slower progression, fatal within weeks to months.

  • Balamuthia mandrillaris: Free-living ameba, also causes GAE.

SEM images of amoebae causing meningoencephalitis

Nervous System Diseases Caused by Prions

Pathogenesis and Diseases

Prions are self-replicating infectious proteins that induce abnormal folding of normal cellular prion proteins (PrPC to PrPSc), leading to spongiform degeneration of brain tissue. These diseases are chronic, fatal, and transmissible (TSEs).

  • Scrapie: Sheep

  • Chronic wasting disease: Deer and elk

  • Creutzfeldt-Jakob disease (CJD): Humans

  • Kuru: Humans (cannibalism)

  • Bovine spongiform encephalopathy (BSE): Cattle (mad cow disease)

TEM and LM of spongiform encephalopathies showing holes in brain tissue Diagram of prion propagation and cell death

  • Prions are resistant to standard sterilization; require NaOH and extended autoclaving at 134°C.

  • No live animal detection test exists for PrPSc.

Diseases Caused by Unidentified Agents

  • Acute flaccid myelitis (AFM): Limb weakness, drooping eyelids, possible link to enterovirus EV-D68.

  • Bell’s palsy: Facial muscle weakness, possibly caused by herpes viruses (HHV1, HHV3, HHV4, HHV5).

  • Chronic fatigue syndrome: Persistent, unexplained fatigue for at least 6 months, possibly triggered by infections.

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