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Microbial Nutrition, Growth, and Development

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Microbial Nutrition and Growth

Introduction to Microbial Nutrition

Microbes, including bacteria and fungi, are highly adaptable organisms capable of thriving in diverse environments due to their versatile strategies for acquiring nutrients and energy. They utilize both organic and inorganic sources for their nutritional needs and employ various biochemical pathways to generate ATP, the universal energy currency of the cell.

Microbial interactions with plants and rock weathering

Carbon and Nitrogen Sources in Microbes

Microbes are classified based on their sources of carbon and nitrogen, which are essential for cellular structure and metabolism.

Carbon Acquisition

  • Autotrophs: These organisms synthesize their own organic molecules from inorganic carbon dioxide (CO2) through processes such as photosynthesis or chemosynthesis. Examples include plants, algae, some bacteria, and phytoplankton.

  • Heterotrophs: These organisms obtain carbon by consuming organic molecules produced by other organisms. This group includes animals, fungi, most protozoa, and most bacteria.

Autotroph vs Heterotroph comparison

Nitrogen Acquisition

  • Nitrogen Fixation: Certain bacteria convert atmospheric nitrogen gas (N2) into ammonia (NH3), a form usable by living organisms. This process is crucial for the biosynthesis of proteins, DNA, and RNA.

  • Some nitrogen-fixing bacteria form symbiotic relationships with legumes, exchanging fixed nitrogen for plant-derived sugars, while others are free-living in soil or water.

Nitrogen-fixing microbes in legumes

Nitrogen Assimilation

Microbes assimilate inorganic nitrogen (NH4+ or NO3-) from the environment, incorporating it into cellular components such as amino acids and nucleic acids. Specialized transport proteins facilitate the uptake of nitrogen compounds across the cell membrane.

Ammonium transport across microbial membrane

Mineralization (Ammonification)

When microbes utilize organic nitrogen, they decompose complex molecules, releasing ammonium (NH4+) into the environment. This process recycles nitrogen from dead organisms and waste, maintaining ecosystem nutrient balance.

Decomposition and mineralization of organic matter

Nutrient Uptake Mechanisms in Microbes

Passive Transport

Passive transport involves the movement of substances across the cell membrane without energy expenditure, driven by concentration gradients.

  • Simple Diffusion: Small, non-polar molecules (e.g., O2, CO2) move directly through the lipid bilayer.

  • Facilitated Diffusion: Larger or charged molecules (e.g., sugars, ions) cross the membrane via specific channel or carrier proteins.

  • Osmosis: The diffusion of water across a semi-permeable membrane, crucial for maintaining cellular osmotic balance.

Diffusion and transport across membranes

Active Transport

Active transport requires energy (usually from ATP) to move substances against their concentration gradients. This is essential for microbes living in nutrient-poor environments.

  • Primary Active Transport: Direct use of ATP by transport proteins (e.g., ABC transporters) to import nutrients.

  • Secondary Active Transport: Utilizes proton gradients established by primary transport to drive the movement of other molecules.

Active transport across the cell membrane

Microbial Cultivation and Growth

The Five I's of Microbial Cultivation

Laboratory cultivation of microbes involves five key steps: Inoculation, Incubation, Isolation, Inspection, and Identification. These steps ensure the growth and study of pure microbial cultures under controlled conditions.

Enumeration of Microbes

Microbial populations are quantified using serial dilution and plating techniques. The number of viable cells is expressed as colony-forming units per milliliter (CFU/mL), with reliable counts obtained from plates containing 30–300 colonies.

Microbial Growth Curve

The microbial growth curve describes the changes in a population over time in a closed system, consisting of four phases:

  • Lag Phase: Cells adapt to new conditions; no division occurs.

  • Log (Exponential) Phase: Rapid cell division and population doubling.

  • Stationary Phase: Growth rate equals death rate due to nutrient depletion and waste accumulation.

  • Death (Decline) Phase: Cell death exceeds division; some cells may enter a viable but non-culturable state.

Summary Table: Microbial Nutrient Acquisition Strategies

Strategy

Source

Key Example

Importance

Autotrophy

CO2 (inorganic carbon)

Cyanobacteria

Primary producers in ecosystems

Heterotrophy

Organic molecules

Most bacteria, fungi

Decomposition and recycling

Nitrogen Fixation

N2 gas

Rhizobium in legumes

Soil fertility, plant growth

Mineralization

Organic nitrogen

Decomposer bacteria

Nutrient cycling

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