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Ch. 6 - Genetic Analysis and Mapping in Bacteria and Bacteriophages
Sanders - Genetic Analysis: An Integrated Approach 3rd Edition
Sanders3rd EditionGenetic Analysis: An Integrated ApproachISBN: 9780135564172Not the one you use?Change textbook
Chapter 6, Problem 20

A triple-auxotrophic strain of E. coli having the genotype phe⁻ met⁻ ara⁻ is used as a recipient strain in a transduction experiment. The strain is unable to synthesize its own phenylalanine or methionine, and it carries a mutation that leaves it unable to utilize the sugar arabinose for growth. The recipient is crossed to a prototrophic strain with the genotype phe⁺ met⁺ ara⁺. The table below shows the selected marker and gives cotransduction frequencies for the unselected markers.
Table showing cotransduction frequencies of selected and unselected markers in a transduction experiment with E. coli strains.
Use the cotransduction data to determine the order of these genes.

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1
Start by understanding the concept of cotransduction. Cotransduction occurs when two or more genes are transferred together during transduction, and the frequency of cotransduction is inversely proportional to the distance between the genes. Genes that are closer together are more likely to be cotransduced.
Examine the table provided. The table shows the cotransduction frequencies for unselected markers when a specific marker is selected. Higher cotransduction frequencies indicate that the genes are closer together.
Analyze the data for each selected marker. For example, when phe⁺ is selected, the cotransduction frequency with met⁺ is 2%, and with ara⁺ is 51%. This suggests that phe⁺ is closer to ara⁺ than to met⁺.
Similarly, when met⁺ is selected, the cotransduction frequency with phe⁺ is 4%, and with ara⁺ is 7%. This suggests that met⁺ is closer to phe⁺ than to ara⁺.
Combine the information to determine the gene order. Based on the cotransduction frequencies, the gene order is likely ara⁺ - phe⁺ - met⁺, as ara⁺ and phe⁺ have the highest cotransduction frequency, indicating they are closest, while met⁺ is farther away.

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Key Concepts

Here are the essential concepts you must grasp in order to answer the question correctly.

Transduction

Transduction is a process of genetic transfer in bacteria where bacteriophages (viruses that infect bacteria) carry DNA from one bacterium to another. This mechanism can lead to genetic recombination and the introduction of new traits, such as antibiotic resistance or metabolic capabilities. Understanding transduction is crucial for analyzing how genes are transferred and how they can be mapped based on cotransduction frequencies.
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Cotransduction Frequency

Cotransduction frequency refers to the likelihood that two genes will be transferred together during the transduction process. This frequency is influenced by the physical proximity of the genes on the bacterial chromosome; genes that are closer together are more likely to be cotransduced. By analyzing these frequencies, researchers can infer the relative positions of genes on a chromosome, which is essential for determining gene order.
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Genetic Mapping

Genetic mapping is the process of determining the arrangement of genes on a chromosome. It involves using data from experiments, such as cotransduction frequencies, to establish the order and distance between genes. This information is vital for understanding gene interactions, functions, and the overall genetic architecture of an organism, particularly in studies involving mutations and genetic engineering.
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Mapping Overview
Related Practice
Textbook Question

An Hfr strain with the genotype cys⁺ lue⁺ met⁺ strS is mated with an F- strain carrying the genotype cys⁻ lue⁻ met⁻ strᴿ. In an interrupted mating experiment, small samples of the conjugating bacteria are withdrawn every 3 minutes for 30 minutes. The withdrawn cells are shaken vigorously to stop conjugation and then placed on three different selection media, composed as follows:


Medium 1: Minimal medium plus leucine, methionine, and streptomycin

Medium 2: Minimal medium plus cysteine, methionine, and streptomycin

Medium 3: Minimal medium plus cysteine, leucine, and streptomycin


List all possible bacterial genotypes growing on each medium.

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Textbook Question

An Hfr strain with the genotype cys⁺ lue⁺ met⁺ strS is mated with an F- strain carrying the genotype cys⁻ lue⁻ met⁻ strᴿ. In an interrupted mating experiment, small samples of the conjugating bacteria are withdrawn every 3 minutes for 30 minutes. The withdrawn cells are shaken vigorously to stop conjugation and then placed on three different selection media, composed as follows:


Medium 1: Minimal medium plus leucine, methionine, and streptomycin

Medium 2: Minimal medium plus cysteine, methionine, and streptomycin

Medium 3: Minimal medium plus cysteine, leucine, and streptomycin


What is the purpose of adding streptomycin to each selection medium?

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Textbook Question

An Hfr strain with the genotype cys⁺ lue⁺ met⁺ strˢ is mated with an F- strain carrying the genotype cys⁻ lue⁻ met⁻ strᴿ. In an interrupted mating experiment, small samples of the conjugating bacteria are withdrawn every 3 minutes for 30 minutes. The withdrawn cells are shaken vigorously to stop conjugation and then placed on three different selection media, composed as follows:


Medium 1: Minimal medium plus leucine, methionine, and streptomycin

Medium 2: Minimal medium plus cysteine, methionine, and streptomycin

Medium 3: Minimal medium plus cysteine, leucine, and streptomycin


The following table shows the number of colonies growing on each selection medium. The sampling time indicates how many minutes have passed since conjugation began.


Sampling Time (minutes)       Number of Colonies

                      Plate 1    Plate 2    Plate 3

      3                 0         0         0

      6                0         0         0

      9                 0        62         0

     12                 0        87         0

     15                 51       124        0

     18                 79       210        62

     21                109       250        85

     24                144       250       111

     27                152       250       122

     30                152       250       122


Determine the order of donor genes cys, leu, and met from the interrupted mating data.

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Textbook Question

A triple-auxotrophic strain of E. coli having the genotype phe⁻ met⁻ ara⁻ is used as a recipient strain in a transduction experiment. The strain is unable to synthesize its own phenylalanine or methionine, and it carries a mutation that leaves it unable to utilize the sugar arabinose for growth. The recipient is crossed to a prototrophic strain with the genotype phe⁺ met⁺ ara⁺. The table below shows the selected marker and gives cotransduction frequencies for the unselected markers.

Identify the compounds present in each of the selective media.

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Textbook Question

Penicillin was first used in the 1940s to treat gonorrhea infections produced by the bacterium Neisseria gonorrhoeae. In 1984, according to the CDC, fewer than 1% of gonorrhea infections were caused by penicillin-resistant N. gonorrhoeae. By 1990, more than 10% of cases were penicillin-resistant, and a few years later the level of resistance was at greater than 95%. Almost every year the CDC issues new treatment guidelines for gonorrhea that identify the recommended antibiotic drugs and dosages.

Why is the CDC so active in making these recommendations?

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Textbook Question

Penicillin was first used in the 1940s to treat gonorrhea infections produced by the bacterium Neisseria gonorrhoeae. In 1984, according to the CDC, fewer than 1% of gonorrhea infections were caused by penicillin-resistant N. gonorrhoeae. By 1990, more than 10% of cases were penicillin-resistant, and a few years later the level of resistance was at greater than 95%. Almost every year the CDC issues new treatment guidelines for gonorrhea that identify the recommended antibiotic drugs and dosages.

What are the short-term implications of these frequent changes for physicians and clinics that treat sexually transmitted diseases like gonorrhea and for individuals infected with gonorrhea?

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