Skip to main content
Pearson+ LogoPearson+ Logo
Ch. 6 - Genetic Analysis and Mapping in Bacteria and Bacteriophages
Sanders - Genetic Analysis: An Integrated Approach 3rd Edition
Sanders3rd EditionGenetic Analysis: An Integrated ApproachISBN: 9780135564172Not the one you use?Change textbook
Chapter 6, Problem 16a

Hfr strains that differ in integrated F factor orientation and site of integration are used to construct consolidated bacterial chromosome maps. The data below show the order of gene transfer for five strains.
Hfr Strain   Order of Gene Transfer (First → Last)
Hfr A        oriT–thr–leu–azi–ton–pro–lac–ade
Hfr B        oriT–mtl–xyl–mal–str–his
Hfr C        oriT–ile–met–thi–thr–leu–azi–ton
Hfr D        oriT–his–trp–gal–ade–lac–pro–ton
Hfr E        oriT–thi–met–ile–mtl–xyl–mal–str
Identify the overlaps between Hfr strains. Identify the orientations of integrated F factors relative to one another.

Verified step by step guidance
1
Step 1: Begin by analyzing the gene transfer order for each Hfr strain. Note the sequence of genes transferred starting from oriT for each strain. This will help identify overlaps and shared regions between strains.
Step 2: Compare the gene transfer orders between strains to identify overlapping genes. For example, observe that Hfr A and Hfr C share the sequence 'thr–leu–azi–ton', while Hfr E and Hfr C share 'thi–met–ile'. Document all such overlaps.
Step 3: Use the overlaps to construct a consolidated bacterial chromosome map. Arrange the genes in a linear sequence, ensuring that overlapping regions are aligned correctly. This will help visualize the shared and unique regions of the chromosome.
Step 4: Determine the orientation of the integrated F factors by analyzing the direction of gene transfer. If the gene order in one strain is reversed compared to another, it indicates that the F factor is integrated in the opposite orientation.
Step 5: Summarize the findings by providing a consolidated map of the bacterial chromosome, indicating the gene order and the orientation of the F factors for each strain. Highlight the overlaps and explain how they contribute to the overall map construction.

Verified video answer for a similar problem:

This video solution was recommended by our tutors as helpful for the problem above.
Video duration:
3m
Was this helpful?

Key Concepts

Here are the essential concepts you must grasp in order to answer the question correctly.

Hfr Strains

Hfr (high frequency of recombination) strains are bacterial strains that have the F factor integrated into their chromosomal DNA. This integration allows for the transfer of chromosomal genes during conjugation, leading to genetic recombination. The orientation and site of integration of the F factor can influence the order in which genes are transferred, making Hfr strains valuable for mapping bacterial chromosomes.
Recommended video:
Guided course
08:52
F Factor and Hfr

Gene Transfer Order

The order of gene transfer in Hfr strains is determined by the sequence in which genes are located on the bacterial chromosome and the direction of transfer during conjugation. By analyzing the order of gene transfer from different Hfr strains, researchers can deduce the relative positions of genes on the chromosome and construct genetic maps. Overlaps in gene transfer sequences between strains can indicate the proximity of genes to one another.
Recommended video:
Guided course
09:09
Mapping Genes

F Factor Orientation

The orientation of the integrated F factor refers to the direction in which the F factor is inserted into the bacterial chromosome. This orientation affects the starting point of gene transfer during conjugation. Different orientations can lead to variations in the gene transfer order, which is crucial for understanding genetic linkage and the construction of chromosome maps in bacterial genetics.
Recommended video:
Guided course
08:52
F Factor and Hfr
Related Practice
Textbook Question

Seven deletion mutations (1 to 7 in the table below) are tested for their ability to form wild-type recombinants with five point mutations (a to e). The symbol "+" indicates that wild-type recombination occurs, and "-" indicates that wild types are not formed. Use the data to construct a genetic map of the order of point mutations, and indicate the segment deleted by each deletion mutation. 

953
views
Textbook Question

A 2013 CDC report identified the practice of routinely adding antibiotic compounds to animal feed as a major culprit in the rapid increase in the number of antibiotic-resistant strains. Agricultural practice in recent decades has encouraged the addition of antibiotics to animal feed to promote growth rather than to treat disease.

Speculate about the process by which feeding antibiotics to animals such as cattle might lead to an increase in the number of antibiotic-resistant strains of bacteria.

549
views
Textbook Question

A 2013 CDC report identified the practice of routinely adding antibiotic compounds to animal feed as a major culprit in the rapid increase in the number of antibiotic-resistant strains. Agricultural practice in recent decades has encouraged the addition of antibiotics to animal feed to promote growth rather than to treat disease.

How might the increase in antibiotic-resistant strains of bacteria in cattle be a threat to human health?

504
views
Textbook Question

Hfr strains that differ in integrated F factor orientation and site of integration are used to construct consolidated bacterial chromosome maps. The data below show the order of gene transfer for five strains.

Hfr Strain   Order of Gene Transfer (First → Last)

Hfr A        oriT–thr–leu–azi–ton–pro–lac–ade

Hfr B        oriT–mtl–xyl–mal–str–his

Hfr C        oriT–ile–met–thi–thr–leu–azi–ton

Hfr D        oriT–his–trp–gal–ade–lac–pro–ton

Hfr E        oriT–thi–met–ile–mtl–xyl–mal–str

Draw a consolidated map of the bacterial chromosome. (Hint: Begin by placing the insertion site for Hfr A at the 2 o'clock position and arranging the genes thr–leu–azi- . . . in clockwise order.)

1689
views
Textbook Question

Five Hfr strains from the same bacterial species are analyzed for their ability to transfer genes to F⁻ recipient bacteria. The data shown below list the origin of transfer (oriT) for each strain and give the order of genes, with the first gene on the left and the last gene on the right. Use the data to construct a circular map of the bacterium.

Hfr Strain     Genes Transferred

Hfr 1         oriT met ala lac gal

Hfr 2         oriT met leu thr azi

Hfr 3         oriT gal pro trp azi

Hfr 4         oriT leu met ala lac

Hfr 5         oriT trp azi thr leu met

1737
views
Textbook Question

An interrupted mating study is carried out on Hfr strains 1, 2, and 3 identified in Problem 17. After conjugation is established, a small sample of the mixture is collected every minute for 20 minutes to determine the distance between genes on the chromosome. Results for each of the three Hfr strains are shown below. The total duration of conjugation (in minutes) is given for each transferred gene.

Hfr strain 1     oriT  met  ala  lac  gal

Duration (min)   0     2    8   13   17

Hfr strain 2     oriT  met  leu  thr   azi

Duration (min)   0     2    7   10   17

Hfr strain 3     oriT  gal   pro  trp   azi

Duration (min)   0     3    8   14   19

For each Hfr strain, draw a time-of-entry profile.

1225
views