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Ch. 6 - Genetic Analysis and Mapping in Bacteria and Bacteriophages
Sanders - Genetic Analysis: An Integrated Approach 3rd Edition
Sanders3rd EditionGenetic Analysis: An Integrated ApproachISBN: 9780135564172Not the one you use?Change textbook
Chapter 6, Problem 14

Seven deletion mutations (1 to 7 in the table below) are tested for their ability to form wild-type recombinants with five point mutations (a to e). The symbol "+" indicates that wild-type recombination occurs, and "-" indicates that wild types are not formed. Use the data to construct a genetic map of the order of point mutations, and indicate the segment deleted by each deletion mutation. 
Table showing deletion mutations and their effects on point mutations in bacteriophage genetics.

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Step 1: Analyze the table to determine the relationship between deletion mutations (1 to 7) and point mutations (a to e). The '+' indicates that recombination restores the wild-type phenotype, while '-' indicates no recombination occurs.
Step 2: Identify the regions deleted by each deletion mutation. For example, if a deletion mutation fails to recombine with a point mutation (indicated by '-'), it suggests that the point mutation lies within the deleted region.
Step 3: Use the patterns of '+' and '-' to infer the order of point mutations. For instance, if deletion mutation 1 fails to recombine with 'a' but recombines with 'b', 'c', 'd', and 'e', then 'a' is likely within the region deleted by mutation 1.
Step 4: Compare the deletion mutations to determine overlapping and non-overlapping regions. For example, deletion mutation 2 recombines with 'a' and 'd' but fails with 'b', 'c', and 'e', suggesting a different deleted segment compared to mutation 1.
Step 5: Construct a genetic map by arranging the point mutations (a to e) in order based on their recombination patterns with the deletion mutations. Indicate the segments deleted by each mutation on the map, ensuring consistency with the data provided in the table.

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Key Concepts

Here are the essential concepts you must grasp in order to answer the question correctly.

Genetic Mapping

Genetic mapping is the process of determining the relative positions of genes on a chromosome. It involves analyzing recombination frequencies between mutations to infer their order and distance. In this context, the data from deletion mutations and point mutations will help construct a genetic map that illustrates how these mutations interact and their spatial arrangement.
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Mapping Overview

Recombination

Recombination is a genetic process where genetic material is exchanged between different chromosomes or within the same chromosome, leading to new allele combinations. In the provided data, the presence of wild-type recombinants (indicated by '+') suggests successful recombination between deletion mutations and point mutations, which is crucial for understanding gene interactions and mapping.
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Recombination after Single Strand Breaks

Deletion Mutations

Deletion mutations involve the loss of a segment of DNA, which can affect gene function and expression. In the context of the question, the seven deletion mutations are tested to see how they influence the formation of wild-type recombinants with point mutations. Understanding which segments are deleted helps in determining the functional relationships between the genes involved.
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Related Practice
Textbook Question

Among the mechanisms of gene transfer in bacteria, which one is capable of transferring the largest chromosome segment from donor to recipient? Which process generally transfers the smallest donor segments to the recipient? Explain your reasoning for both answers.

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Textbook Question

What is lateral gene transfer? How might it take place between two bacterial cells?

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Textbook Question

Lateral gene transfer is thought to have played a major role in the evolution of bacterial genomes. Describe the impact of LGT on bacterial genome evolution.

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Textbook Question

A 2013 CDC report identified the practice of routinely adding antibiotic compounds to animal feed as a major culprit in the rapid increase in the number of antibiotic-resistant strains. Agricultural practice in recent decades has encouraged the addition of antibiotics to animal feed to promote growth rather than to treat disease.

Speculate about the process by which feeding antibiotics to animals such as cattle might lead to an increase in the number of antibiotic-resistant strains of bacteria.

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Textbook Question

A 2013 CDC report identified the practice of routinely adding antibiotic compounds to animal feed as a major culprit in the rapid increase in the number of antibiotic-resistant strains. Agricultural practice in recent decades has encouraged the addition of antibiotics to animal feed to promote growth rather than to treat disease.

How might the increase in antibiotic-resistant strains of bacteria in cattle be a threat to human health?

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Textbook Question

Hfr strains that differ in integrated F factor orientation and site of integration are used to construct consolidated bacterial chromosome maps. The data below show the order of gene transfer for five strains.

Hfr Strain   Order of Gene Transfer (First → Last)

Hfr A        oriT–thr–leu–azi–ton–pro–lac–ade

Hfr B        oriT–mtl–xyl–mal–str–his

Hfr C        oriT–ile–met–thi–thr–leu–azi–ton

Hfr D        oriT–his–trp–gal–ade–lac–pro–ton

Hfr E        oriT–thi–met–ile–mtl–xyl–mal–str

Identify the overlaps between Hfr strains. Identify the orientations of integrated F factors relative to one another.

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