The CBF genes of Arabidopsis are induced by exposure of the plants to low temperature. Can you design a method that would reveal these changes in gene expression in a way that a farmer could recognize them by observing plants growing in the field?
Table of contents
- 1. Introduction to Genetics51m
- 2. Mendel's Laws of Inheritance3h 37m
- 3. Extensions to Mendelian Inheritance2h 41m
- 4. Genetic Mapping and Linkage2h 28m
- 5. Genetics of Bacteria and Viruses1h 21m
- 6. Chromosomal Variation1h 48m
- 7. DNA and Chromosome Structure56m
- 8. DNA Replication1h 10m
- 9. Mitosis and Meiosis1h 34m
- 10. Transcription1h 0m
- 11. Translation58m
- 12. Gene Regulation in Prokaryotes1h 19m
- 13. Gene Regulation in Eukaryotes44m
- 14. Genetic Control of Development44m
- 15. Genomes and Genomics1h 50m
- 16. Transposable Elements47m
- 17. Mutation, Repair, and Recombination1h 6m
- 18. Molecular Genetic Tools19m
- 19. Cancer Genetics29m
- 20. Quantitative Genetics1h 26m
- 21. Population Genetics50m
- 22. Evolutionary Genetics29m
15. Genomes and Genomics
Proteomics
Problem 20c
Textbook Question
An interactive Web site for the Human Proteome Map (HPM) is available at http://www.humanproteomemap.org. Visit this site, and then answer the question.
Use the 'Query' tab and select the 'Gene family' dropdown menu to do a search on the distribution of proteins encoded by a pathway of interest to you. Search in fetal tissues, adult tissues, or both.
Verified step by step guidance1
Understand that this problem involves using an external database (Human Proteome Map) to explore protein expression patterns, which is a practical application of genetics and proteomics.
Navigate to the website http://www.humanproteomemap.org and locate the 'Query' tab as instructed.
Within the 'Query' tab, find the 'Gene family' dropdown menu. This menu allows you to select a specific gene family or pathway of interest to analyze protein distribution.
Choose a pathway or gene family relevant to your study or curiosity, then select the tissue type(s) you want to investigate: fetal tissues, adult tissues, or both.
Submit the query and interpret the results by examining the distribution and expression levels of proteins encoded by the selected pathway across the chosen tissues, which can provide insights into developmental or tissue-specific protein expression.
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Key Concepts
Here are the essential concepts you must grasp in order to answer the question correctly.
Human Proteome Map (HPM)
The Human Proteome Map is an online resource that catalogs the proteins expressed in various human tissues and organs. It provides data on protein presence and abundance across fetal and adult tissues, enabling researchers to explore protein distribution and function in different biological contexts.
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Gene Families and Protein Pathways
Gene families consist of groups of related genes that encode proteins with similar sequences or functions. Understanding gene families helps in studying protein pathways, which are series of interactions among proteins that carry out specific biological processes within cells.
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Tissue-Specific Protein Expression
Proteins can be expressed differently depending on the tissue type and developmental stage, such as fetal versus adult tissues. Analyzing tissue-specific expression patterns helps reveal the roles of proteins in development, physiology, and disease.
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