In a recombinant DNA cloning experiment, how can we determine whether DNA fragments of interest have been incorporated into plasmids and, once host cells are transformed, which cells contain recombinant DNA?
Ch. 20 - Recombinant DNA Technology

Chapter 20, Problem 1c
How has DNA-sequencing technology evolved in response to the emerging needs of genome scientists?
Verified step by step guidance1
Step 1: Understand the initial state of DNA sequencing technology, starting with Sanger sequencing, which was the first widely used method and provided relatively low-throughput, accurate sequencing of short DNA fragments.
Step 2: Recognize the limitations of early sequencing methods, such as low speed, high cost, and limited scalability, which created a need for faster and more cost-effective technologies as genome projects expanded.
Step 3: Explore the development of next-generation sequencing (NGS) technologies, which increased throughput dramatically by allowing millions of DNA fragments to be sequenced simultaneously, reducing cost and time per genome.
Step 4: Consider the emergence of third-generation sequencing technologies, which focus on sequencing single molecules of DNA in real-time, providing longer read lengths and the ability to detect epigenetic modifications, thus addressing challenges in genome assembly and structural variation detection.
Step 5: Reflect on how these technological advancements have been driven by the needs of genome scientists for higher accuracy, speed, cost efficiency, and the ability to analyze complex genomic features, enabling large-scale projects like the Human Genome Project and personalized medicine.

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Key Concepts
Here are the essential concepts you must grasp in order to answer the question correctly.
Advancements in DNA Sequencing Technologies
DNA sequencing has evolved from first-generation methods like Sanger sequencing to high-throughput next-generation sequencing (NGS) and third-generation single-molecule sequencing. These advancements have increased speed, accuracy, and reduced costs, enabling large-scale genome projects and detailed genetic analysis.
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Demand for High-Throughput and Cost-Effective Sequencing
As genome scientists sought to sequence entire genomes quickly and affordably, sequencing technologies adapted to process millions of DNA fragments simultaneously. This shift addressed the need for large data volumes, facilitating studies in population genetics, personalized medicine, and evolutionary biology.
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Integration of Bioinformatics and Data Analysis
The explosion of sequencing data required advanced computational tools to store, analyze, and interpret genetic information. Bioinformatics has become essential for managing sequencing outputs, enabling genome assembly, variant detection, and functional annotation critical to modern genomics research.
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Related Practice
Textbook Question
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Textbook Question
What steps make PCR a chain reaction that can produce millions of copies of a specific DNA molecule in a matter of hours without using host cells?
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Textbook Question
How can gene knockouts, transgenic animals, and gene editing techniques be used to explore gene function?
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Textbook Question
Write a short essay or sketch a diagram that provides an overview of how recombinant DNA techniques help geneticists study genes.
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Textbook Question
What roles do restriction enzymes, vectors, and host cells play in recombinant DNA studies? What role does DNA ligase perform in a DNA cloning experiment? How does the action of DNA ligase differ from the function of restriction enzymes?
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